fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G74840.1 SPAPLSLNLSLASSNL at 237/265 in AT1G74840.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm015689 SIDPPTLSLGLSLSSS in 256/294 AT1G74840.1 1st_1st 0.435207823 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G74840.1     MADGSTSSSESTTACAGSGTRREIMLFGVRVVLDPMRKCVSLNNLSDYEQTAETPKIDGE
gm015689_Glyma0 MPLSSSSSSAVDSAVSG-----EIMLFGVRVVVDSMRKSVSMNNLSQY----ELP-----
                *. .*:***   :* :*     **********:*.***.**:****:*    * *     

AT1G74840.1     DRDEQDMNKTPAGYASADEALPMSSSNGKIERKRGVPWTEEEHKLFLLGLQRVGKGDWKG
gm015689_Glyma0 -RDAANAKDDAAGYASADDAAPINSDKNR-DRKRGIPWTEEEHKLFLVGLQKVGKGDWRG
                 **  : :. .*******:* *:.*.:.: :****:***********:***:******:*

AT1G74840.1     ISRNFVKTRTSTQVASHAQKYFLRRSNLNRRRRRSSLFDMTTDTV--IPMEEDHQVLIQE
gm015689_Glyma0 ISRNYVKTRTPTQVASHAQKYFLRRTNLNRRRRRSSLFDITTDSVSTTPMEEGVQIQHQD
                ****:*****.**************:*************:***:*   ****. *:  *:

AT1G74840.1     NTS--QSSSPV-PEINNFSIHPVMQVFPE------FPVPTGNQ----SYGQLT------S
gm015689_Glyma0 NVSLFHPVYPVTPEGSNMNGFPKMSMYPKDVGSGVMSVQAGNPMETLTLGQGNVEQNGPS
                *.*  :.  ** ** .*:. .* *.::*:      :.* :**     : ** .      *

AT1G74840.1     SNLINLVPL--------------TFQS-SPAPLSLNLSLASSNLNEPSPSMH------PA
gm015689_Glyma0 TKLVCTTPIVPDHRGSTVSDITASLSSIDPPTLSLGLSLSSSP-RQTSSSIHAALHALPY
                ::*:  .*:              ::.* .*..***.***:**  .:.*.*:*      * 

AT1G74840.1     FNT----IGVA
gm015689_Glyma0 FNNQDSIISAA
                **.    *..*
BoxShade v3.31 C (beta, 970507) Output
AT1G74840.1     M A D G S T S S S E S T T A C A G S G T R R E I M L F G V R V V L D P M R K C V S L N N L S D Y E Q T A E T P K I D G E
gm015689_Glyma0    M P L S S S S S S A V D S A V S G - - - - - E I M L F G V R V V V D S M R K S V S M N N L S Q Y - - - - E L P - - - - -
 
AT1G74840.1     D R D E Q D M N K T P A G Y A S A D E A L P M S S S N G K I E R K R G V P W T E E E H K L F L L G L Q R V G K G D W K G
gm015689_Glyma0    - R D A A N A K D D A A G Y A S A D D A A P I N S D K N R - D R K R G I P W T E E E H K L F L V G L Q K V G K G D W R G
 
AT1G74840.1     I S R N F V K T R T S T Q V A S H A Q K Y F L R R S N L N R R R R R S S L F D M T T D T V - - I P M E E D H Q V L I Q E
gm015689_Glyma0    I S R N Y V K T R T P T Q V A S H A Q K Y F L R R T N L N R R R R R S S L F D I T T D S V S T T P M E E G V Q I Q H Q D
 
AT1G74840.1     N T S - - Q S S S P V - P E I N N F S I H P V M Q V F P E - - - - - - F P V P T G N Q - - - - S Y G Q L T - - - - - - S
gm015689_Glyma0    N V S L F H P V Y P V T P E G S N M N G F P K M S M Y P K D V G S G V M S V Q A G N P M E T L T L G Q G N V E Q N G P S
 
AT1G74840.1     S N L I N L V P L - - - - - - - - - - - - - - T F Q S - S P A P L S L N L S L A S S N L N E P S P S M H - - - - - - P A
gm015689_Glyma0    T K L V C T T P I V P D H R G S T V S D I T A S L S S I D P P T L S L G L S L S S S P - R Q T S S S I H A A L H A L P Y
 
AT1G74840.1     F N T - - - - I G V A
gm015689_Glyma0    F N N Q D S I I S A A
 
0