fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G74840.1 SPAPLSLNLSLASSNL at 237/265 in AT1G74840.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm015689 SIDPPTLSLGLSLSSS in 256/294 AT1G74840.1 1st_1st 0.435207823 Ia
Gm011101 IDPPPTLSLGLSFSSD in 248/285 AT1G74840.1 not_1st 0.420537897 II
Gm010089 SIDPPTLSLGLSLSSS in 255/292 AT1G74840.1 not_1st 0.415647921 II
Gm046558 AVDPPTLSLGLSFSSD in 250/287 AT1G74840.1 not_1st 0.413202933 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G74840.1     MADGSTSSSESTTACAGSGTRREIMLFGVRVVLDPMRKCVSLNNLSDYEQTAETPKIDGE
gm010089_Glyma0 -MLLSSSCSAAGSAVSG-----EIMLFGVRVVVDSMRKSVSMNNLSQYELPRDAA----N
gm011101_Glyma0 ---MSRAS----SAASG-----EIMLFGVRVVVDSMRKSVSMNNLSQYEHPLDATTT-NN
gm046558_Glyma1 ---MSRASSAADSAASG-----EIILFGVRVVVDSMRKSVSMSNLSQYEHPQDGS----N
gm015689_Glyma0 MPLSSSSSSAVDSAVSG-----EIMLFGVRVVVDSMRKSVSMNNLSQYELPRDAA----N
                    * :.    :* :*     **:*******:*.***.**:.***:** . : .    :

AT1G74840.1     DRDEQDMNKTPAGYASADEALPMSSSN-GKIERKRGVPWTEEEHKLFLLGLQRVGKGDWK
gm010089_Glyma0 AKDD-----VAAGYASADDAAPINSG--KNRDRKRGIPWTEEEHKLFLVGLQKVGKGDWR
gm011101_Glyma0 NKDA-----VAAGYASADDAAPQNSGRHRERERKRGVPWTEEEHKLFLVGLQKVGKGDWR
gm046558_Glyma1 NKDA-----LAAGYASADDAAPQNSGRLRERERKRGVPWTEEEHKLFLVGLQKVGKGDWR
gm015689_Glyma0 AKDD------AAGYASADDAAPINSD--KNRDRKRGIPWTEEEHKLFLVGLQKVGKGDWR
                 :*       .*******:* * .*.   : :****:***********:***:******:

AT1G74840.1     GISRNFVKTRTSTQVASHAQKYFLRRSNLNRRRRRSSLFDMTTDTV--IPMEEDHQVLIQ
gm010089_Glyma0 GISRNYVKTRTPTQVASHAQKYFLRRTNLNRRRRRSSLFDITTDSVSTTPVEEG-QIQHQ
gm011101_Glyma0 GISKNYVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVSAIPMEEE-QVQNQ
gm046558_Glyma1 GISKNYVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVSAIPMEGE-QVQNQ
gm015689_Glyma0 GISRNYVKTRTPTQVASHAQKYFLRRTNLNRRRRRSSLFDITTDSVSTTPMEEGVQIQHQ
                ***:*:*****.**************:*************:***:*   *:*   *:  *

AT1G74840.1     ENTSQSSS--PV----PEINNFSIHPVMQVFPE-------FPVP--TGNQ------SYGQ
gm010089_Glyma0 DNVSLFR---PVYPVTPEGSYMNGFPMMSMYPKDVG-SRVMSVQ--AGNPMETLTLEQGN
gm011101_Glyma0 DTLCHSQQQ-PVFPA--ETSKINGFPAMPVYQFGVGSSGVISVQ-GTGNPMEELTLGQGN
gm046558_Glyma1 DTLSHSQQQSPLFPA--ETSKINGFPMMPVYQFGFGSSGVISVQGGNGNPMEELTLGQGN
gm015689_Glyma0 DNVSLFH---PVYPVTPEGSNMNGFPKMSMYPKDVG-SGVMSVQ--AGNPMETLTLGQGN
                :. .      *:     * . :. .* * ::         :.*    **         *:

AT1G74840.1     LTSSN-------LINLVPL------------TFQSS----PAPLSLNLSLASSNLNEPSP
gm010089_Glyma0 VEQNDPSTKLVCTIPIVPDHSGSTVSDI---TASLSSID-PPTLSLGLSLSSSQRQTSST
gm011101_Glyma0 VEKHN-----------VPN-KASTVSGIITPGSSSSAIDPPPTLSLGLSFSSDQRQTSSR
gm046558_Glyma1 VEKHN-----------VPN-KVSTVSDIITPSSSSSAVD-PPTLSLGLSFSSDQRQTSSR
gm015689_Glyma0 VEQNGPSTKLVCTTPIVPDHRGSTVSDI---TASLSSID-PPTLSLGLSLSSSPRQTSSS
                : . .           **               . *    *..***.**::*.  : .* 

AT1G74840.1     ---SMH--PAFNT----IGVA
gm010089_Glyma0 -HSALHALPCFNNQDSIISVA
gm011101_Glyma0 -HSALHAMQCFSNGDSIISVA
gm046558_Glyma1 -HSALHAIQCFSNGESIISVA
gm015689_Glyma0 IHAALHALPYFNNQDSIISAA
                   ::*    *..    *..*
BoxShade v3.31 C (beta, 970507) Output
AT1G74840.1     M A D G S T S S S E S T T A C A G S G T R R E I M L F G V R V V L D P M R K C V S L N N L S D Y E Q T A E T P K I D G E
gm010089_Glyma0    - M L L S S S C S A A G S A V S G - - - - - E I M L F G V R V V V D S M R K S V S M N N L S Q Y E L P R D A A - - - - N
gm011101_Glyma0    - - - M S R A S - - - - S A A S G - - - - - E I M L F G V R V V V D S M R K S V S M N N L S Q Y E H P L D A T T T - N N
gm046558_Glyma1    - - - M S R A S S A A D S A A S G - - - - - E I I L F G V R V V V D S M R K S V S M S N L S Q Y E H P Q D G S - - - - N
gm015689_Glyma0    M P L S S S S S S A V D S A V S G - - - - - E I M L F G V R V V V D S M R K S V S M N N L S Q Y E L P R D A A - - - - N
 
AT1G74840.1     D R D E Q D M N K T P A G Y A S A D E A L P M S S S N - G K I E R K R G V P W T E E E H K L F L L G L Q R V G K G D W K
gm010089_Glyma0    A K D D - - - - - V A A G Y A S A D D A A P I N S G - - K N R D R K R G I P W T E E E H K L F L V G L Q K V G K G D W R
gm011101_Glyma0    N K D A - - - - - V A A G Y A S A D D A A P Q N S G R H R E R E R K R G V P W T E E E H K L F L V G L Q K V G K G D W R
gm046558_Glyma1    N K D A - - - - - L A A G Y A S A D D A A P Q N S G R L R E R E R K R G V P W T E E E H K L F L V G L Q K V G K G D W R
gm015689_Glyma0    A K D D - - - - - - A A G Y A S A D D A A P I N S D - - K N R D R K R G I P W T E E E H K L F L V G L Q K V G K G D W R
 
AT1G74840.1     G I S R N F V K T R T S T Q V A S H A Q K Y F L R R S N L N R R R R R S S L F D M T T D T V - - I P M E E D H Q V L I Q
gm010089_Glyma0    G I S R N Y V K T R T P T Q V A S H A Q K Y F L R R T N L N R R R R R S S L F D I T T D S V S T T P V E E G - Q I Q H Q
gm011101_Glyma0    G I S K N Y V K T R T P T Q V A S H A Q K Y F L R R S N L N R R R R R S S L F D I T T D T V S A I P M E E E - Q V Q N Q
gm046558_Glyma1    G I S K N Y V K T R T P T Q V A S H A Q K Y F L R R S N L N R R R R R S S L F D I T T D T V S A I P M E G E - Q V Q N Q
gm015689_Glyma0    G I S R N Y V K T R T P T Q V A S H A Q K Y F L R R T N L N R R R R R S S L F D I T T D S V S T T P M E E G V Q I Q H Q
 
AT1G74840.1     E N T S Q S S S - - P V - - - - P E I N N F S I H P V M Q V F P E - - - - - - - F P V P - - T G N Q - - - - - - S Y G Q
gm010089_Glyma0    D N V S L F R - - - P V Y P V T P E G S Y M N G F P M M S M Y P K D V G - S R V M S V Q - - A G N P M E T L T L E Q G N
gm011101_Glyma0    D T L C H S Q Q Q - P V F P A - - E T S K I N G F P A M P V Y Q F G V G S S G V I S V Q - G T G N P M E E L T L G Q G N
gm046558_Glyma1    D T L S H S Q Q Q S P L F P A - - E T S K I N G F P M M P V Y Q F G F G S S G V I S V Q G G N G N P M E E L T L G Q G N
gm015689_Glyma0    D N V S L F H - - - P V Y P V T P E G S N M N G F P K M S M Y P K D V G - S G V M S V Q - - A G N P M E T L T L G Q G N
 
AT1G74840.1     L T S S N - - - - - - - L I N L V P L - - - - - - - - - - - - T F Q S S - - - - P A P L S L N L S L A S S N L N E P S P
gm010089_Glyma0    V E Q N D P S T K L V C T I P I V P D H S G S T V S D I - - - T A S L S S I D - P P T L S L G L S L S S S Q R Q T S S T
gm011101_Glyma0    V E K H N - - - - - - - - - - - V P N - K A S T V S G I I T P G S S S S A I D P P P T L S L G L S F S S D Q R Q T S S R
gm046558_Glyma1    V E K H N - - - - - - - - - - - V P N - K V S T V S D I I T P S S S S S A V D - P P T L S L G L S F S S D Q R Q T S S R
gm015689_Glyma0    V E Q N G P S T K L V C T T P I V P D H R G S T V S D I - - - T A S L S S I D - P P T L S L G L S L S S S P R Q T S S S
 
AT1G74840.1     - - - S M H - - P A F N T - - - - I G V A
gm010089_Glyma0    - H S A L H A L P C F N N Q D S I I S V A
gm011101_Glyma0    - H S A L H A M Q C F S N G D S I I S V A
gm046558_Glyma1    - H S A L H A I Q C F S N G E S I I S V A
gm015689_Glyma0    I H A A L H A L P Y F N N Q D S I I S A A
 
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