fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G75080.1 DVGMEDLELTLGNGKA at 323/336 in AT1G75080.1
DVGMEDLELTLGNGKA at 323/336 in AT1G75080.2
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt039869 EVGLDDLELTLGGGKA in 305/317 AT1G75080.2 1st_not 0.645403377 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G75080.1     MTSDGATSTSAAAAAAAAAAARRKPSWRERENNRRRERRRRAVAAKIYTGLRAQGDYNLP
pt039869_POPTR_ MTSDGATSTS----AAAAATTRRKPSWRERENNRRRERRRRAIAAKIFTGLRAQGNYNLP
                **********    *****::*********************:****:*******:****

AT1G75080.1     KHCDNNEVLKALCVEAGWVVEEDGTTYRKGCKPLPGEIAGTSSRVTPYSSQNQSPLSSAF
pt039869_POPTR_ KYCDNNEVLKALCAEAGWVVEEDGTTYRKGHRPPPIEIVGSSMRVTPYSSQNPSPLSSSF
                *:***********.**************** :* * **.*:* ********* *****:*

AT1G75080.1     QSPIPSYQVSPSSSSFPSPSRGEPNNNMSSTFFPFLRNGGIPSSLPSLRISNSCPVTPPV
pt039869_POPTR_ PSPIPSYQVSPSSSSFPSPTRGD--NNVSSNLLPFLQS-AIPLSLPPLRISNSAPVTPPL
                 ******************:**:  **:**.::***:. .** ***.******.*****:

AT1G75080.1     SSPTSKNPKPLPNWESIAKQSMAIAKQSMASFNYPFYAVSAPASPTHRHQFHTPATIPEC
pt039869_POPTR_ SSPTSRNPKPIPNWD-------FIAKQSMASFSYPFNAVSAPASPTHR-QFHAPATIPEC
                *****:****:***:        *********.*** *********** ***:*******

AT1G75080.1     DESDSSTVDSGHWISFQKFAQQQPFSASMVPTSPTFNLVKPAPQQMSPNTAAFQEIGQSS
pt039869_POPTR_ DESDSSTVESGQWISFQKFA---PSVAAAMPTSPTYNLVKPVARQILSNNLV-KDNGMSM
                ********:**:********   *  *: :*****:*****..:*: .*. . :: * * 

AT1G75080.1     EFKFENSQVKPWEGERIHDVGMEDLELTLGNGKARG
pt039869_POPTR_ DFEFGSEQVKPWEGERIHEVGLDDLELTLGGGKARS
                :*:* ..***********:**::*******.****.
BoxShade v3.31 C (beta, 970507) Output
AT1G75080.1     M T S D G A T S T S A A A A A A A A A A A R R K P S W R E R E N N R R R E R R R R A V A A K I Y T G L R A Q G D Y N L P
pt039869_POPTR_    M T S D G A T S T S - - - - A A A A A T T R R K P S W R E R E N N R R R E R R R R A I A A K I F T G L R A Q G N Y N L P
 
AT1G75080.1     K H C D N N E V L K A L C V E A G W V V E E D G T T Y R K G C K P L P G E I A G T S S R V T P Y S S Q N Q S P L S S A F
pt039869_POPTR_    K Y C D N N E V L K A L C A E A G W V V E E D G T T Y R K G H R P P P I E I V G S S M R V T P Y S S Q N P S P L S S S F
 
AT1G75080.1     Q S P I P S Y Q V S P S S S S F P S P S R G E P N N N M S S T F F P F L R N G G I P S S L P S L R I S N S C P V T P P V
pt039869_POPTR_    P S P I P S Y Q V S P S S S S F P S P T R G D - - N N V S S N L L P F L Q S - A I P L S L P P L R I S N S A P V T P P L
 
AT1G75080.1     S S P T S K N P K P L P N W E S I A K Q S M A I A K Q S M A S F N Y P F Y A V S A P A S P T H R H Q F H T P A T I P E C
pt039869_POPTR_    S S P T S R N P K P I P N W D - - - - - - - F I A K Q S M A S F S Y P F N A V S A P A S P T H R - Q F H A P A T I P E C
 
AT1G75080.1     D E S D S S T V D S G H W I S F Q K F A Q Q Q P F S A S M V P T S P T F N L V K P A P Q Q M S P N T A A F Q E I G Q S S
pt039869_POPTR_    D E S D S S T V E S G Q W I S F Q K F A - - - P S V A A A M P T S P T Y N L V K P V A R Q I L S N N L V - K D N G M S M
 
AT1G75080.1     E F K F E N S Q V K P W E G E R I H D V G M E D L E L T L G N G K A R G
pt039869_POPTR_    D F E F G S E Q V K P W E G E R I H E V G L D D L E L T L G G G K A R S
 
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