fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G75240.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt002548 not found in 290aa AT1G75240.1 1st_1st 0.574712643 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G75240.1     MDMRSHEMIERRREDNGNNNGGVVISNIISTNIDDNC----------NGNNNNTRVSCNS
pt002548_POPTR_ MEIRGLE-------------------NDIRTSVPSSYSHQSSGLEGRNGNHNGTTVLTYT
                *::*. *                   * * *.: ..           ***:*.* *   :

AT1G75240.1     QTLDHH----QSKSPSSFSISAAA----KPTVRYRECLKNHAASVGGSVHDGCGEFMPSG
pt002548_POPTR_ QTLDHQRQPSRSPNPDRLAIISSGPNSKTSNTRYRECLRNHAANVGGSVYDGCGEFMPGG
                *****:    :* .*. ::* ::.    ....******:****.*****:********.*

AT1G75240.1     EEGTIEALRCAACDCHRNFHRKEMDGVGSSDLISHHRHHHYHHNQYGGGGGRRPPPPNMM
pt002548_POPTR_ EEGSLEALKCAACECHRNFHRREIDG----------------ETQFSPGSRRSA----TM
                ***::***:****:*******:*:**                ..*:. *. * .     *

AT1G75240.1     LNPLMLPPP-PNYQPIHHH-----KYGM---SPPGGGGMVTPMSVAYGGGGGGAESSSED
pt002548_POPTR_ VHSLQLPPPLPSPAVLHHHHHHHQRYSMGLHTSPNTANMVQPMSVAFGGVSGGTESSSED
                ::.* **** *.   :***     :*.*   :.*. ..** *****:** .**:******

AT1G75240.1     LNLYGQSSGEGAGAAAGQMAFSMSSSKKRFRTKFTTDQKERMMDFAEKLGWRMNKQDEEE
pt002548_POPTR_ LNPF-QSNADGVPPPP---PYVM--SKKRFRTKFTPEQKDKMMEFADKVGWRINKQDDEE
                ** : **..:*. ...   .: *  **********.:**::**:**:*:***:****:**

AT1G75240.1     LKRFCGEIGVKRQVFKVWMHNNKNNAKKPPTPTTTL
pt002548_POPTR_ VHKFCAEVGVRRQVFKVWMHNNK-NLKKQPQPTSST
                :::**.*:**:************ * ** * **::
BoxShade v3.31 C (beta, 970507) Output
AT1G75240.1     M D M R S H E M I E R R R E D N G N N N G G V V I S N I I S T N I D D N C - - - - - - - - - - N G N N N N T R V S C N S
pt002548_POPTR_    M E I R G L E - - - - - - - - - - - - - - - - - - - N D I R T S V P S S Y S H Q S S G L E G R N G N H N G T T V L T Y T
 
AT1G75240.1     Q T L D H H - - - - Q S K S P S S F S I S A A A - - - - K P T V R Y R E C L K N H A A S V G G S V H D G C G E F M P S G
pt002548_POPTR_    Q T L D H Q R Q P S R S P N P D R L A I I S S G P N S K T S N T R Y R E C L R N H A A N V G G S V Y D G C G E F M P G G
 
AT1G75240.1     E E G T I E A L R C A A C D C H R N F H R K E M D G V G S S D L I S H H R H H H Y H H N Q Y G G G G G R R P P P P N M M
pt002548_POPTR_    E E G S L E A L K C A A C E C H R N F H R R E I D G - - - - - - - - - - - - - - - - E T Q F S P G S R R S A - - - - T M
 
AT1G75240.1     L N P L M L P P P - P N Y Q P I H H H - - - - - K Y G M - - - S P P G G G G M V T P M S V A Y G G G G G G A E S S S E D
pt002548_POPTR_    V H S L Q L P P P L P S P A V L H H H H H H H Q R Y S M G L H T S P N T A N M V Q P M S V A F G G V S G G T E S S S E D
 
AT1G75240.1     L N L Y G Q S S G E G A G A A A G Q M A F S M S S S K K R F R T K F T T D Q K E R M M D F A E K L G W R M N K Q D E E E
pt002548_POPTR_    L N P F - Q S N A D G V P P P P - - - P Y V M - - S K K R F R T K F T P E Q K D K M M E F A D K V G W R I N K Q D D E E
 
AT1G75240.1     L K R F C G E I G V K R Q V F K V W M H N N K N N A K K P P T P T T T L
pt002548_POPTR_    V H K F C A E V G V R R Q V F K V W M H N N K - N L K K Q P Q P T S S T
 
0