fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G75240.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb006069 not found in 302aa AT4G24660.1 not_not 0.465517241 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G75240.1     MDMRSHEMIERRREDNGNNNGGVVISNIISTNIDDNCNGNNNNTRVSCNSQTLDHHQSKS
Sb006069_Sorbi1 MDFDDH--------DDG------------------------------------DEEMAPM
                **: .*        *:*                                    *.. :  

AT1G75240.1     PSSFS----------------ISAAAKPTV--------------------------RYRE
Sb006069_Sorbi1 PVSSSYEAPPLAVAAGGFAGGVAAAPKPPVGEPGGGRASKAPSGLGLGGLHGAGGGRYRE
                * * *                ::**.**.*                          ****

AT1G75240.1     CLKNHAASVGGSVHDGCGEFMPSGEEGTIEALRCAACDCHRNFHRKEMDG------VGSS
Sb006069_Sorbi1 CLKNHAVGIGGHAVDGCGEFMPAGEEGTLDALRCAACNCHRNFHRKESPAAAEGSPISSA
                ******..:** . ********:*****::*******:*********  .      :.*:

AT1G75240.1     DLISH----HRHHHY---------------HHNQYGGGGGRRPPPPNMMLN---PLMLPP
Sb006069_Sorbi1 ALVAYGGTPHQHHHFSPYYRTPAGAGYFHHHHHQ-------QPPPLHHMAHTPRPLALP-
                 *:::    *:***:               **:*       :*** : * :   ** ** 

AT1G75240.1     PPNYQPIHHHKYGMSPPGG-------GGMVTPMSVAYG---------GGGGGAESSSEDL
Sb006069_Sorbi1 ------------STSPHSGRDDGDDLSGM--PMS-AMGPLTLSGMSLGGSGGAGPS----
                            . ** .*       .**  *** * *         **.*** .*    

AT1G75240.1     NLYGQSSGEGAGAAAGQMAFSMSSSKKRFRTKFTTDQKERMMDFAEKLGWRMNKQDEEEL
Sb006069_Sorbi1 ---GGSGGSGSG-------------KKRFRTKFTQEQKDKMLAFAERVGWRIQKHDEAAV
                   * *.*.*:*             ********* :**::*: ***::***::*:**  :

AT1G75240.1     KRFCGEIGVKRQVFKVWMHNNKNNAKKPPTPTTTL
Sb006069_Sorbi1 QQFCDEVGVKRHVLKVWMHNNKHTLGKKP------
                ::**.*:****:*:********:.  * *
BoxShade v3.31 C (beta, 970507) Output
AT1G75240.1     M D M R S H E M I E R R R E D N G N N N G G V V I S N I I S T N I D D N C N G N N N N T R V S C N S Q T L D H H Q S K S
Sb006069_Sorbi1    M D F D D H - - - - - - - - D D G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - D E E M A P M
 
AT1G75240.1     P S S F S - - - - - - - - - - - - - - - - I S A A A K P T V - - - - - - - - - - - - - - - - - - - - - - - - - - R Y R E
Sb006069_Sorbi1    P V S S S Y E A P P L A V A A G G F A G G V A A A P K P P V G E P G G G R A S K A P S G L G L G G L H G A G G G R Y R E
 
AT1G75240.1     C L K N H A A S V G G S V H D G C G E F M P S G E E G T I E A L R C A A C D C H R N F H R K E M D G - - - - - - V G S S
Sb006069_Sorbi1    C L K N H A V G I G G H A V D G C G E F M P A G E E G T L D A L R C A A C N C H R N F H R K E S P A A A E G S P I S S A
 
AT1G75240.1     D L I S H - - - - H R H H H Y - - - - - - - - - - - - - - - H H N Q Y G G G G G R R P P P P N M M L N - - - P L M L P P
Sb006069_Sorbi1    A L V A Y G G T P H Q H H H F S P Y Y R T P A G A G Y F H H H H H Q - - - - - - - Q P P P L H H M A H T P R P L A L P -
 
AT1G75240.1     P P N Y Q P I H H H K Y G M S P P G G - - - - - - - G G M V T P M S V A Y G - - - - - - - - - G G G G G A E S S S E D L
Sb006069_Sorbi1    - - - - - - - - - - - - S T S P H S G R D D G D D L S G M - - P M S - A M G P L T L S G M S L G G S G G A G P S - - - -
 
AT1G75240.1     N L Y G Q S S G E G A G A A A G Q M A F S M S S S K K R F R T K F T T D Q K E R M M D F A E K L G W R M N K Q D E E E L
Sb006069_Sorbi1    - - - G G S G G S G S G - - - - - - - - - - - - - K K R F R T K F T Q E Q K D K M L A F A E R V G W R I Q K H D E A A V
 
AT1G75240.1     K R F C G E I G V K R Q V F K V W M H N N K N N A K K P P T P T T T L
Sb006069_Sorbi1    Q Q F C D E V G V K R H V L K V W M H N N K H T L G K K P - - - - - -
 
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