fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G75250.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt018851 not found in 99aa AT4G39250.1 1st_not 0.474708171 II
Pt000040 not found in 84aa AT1G75250.1 not_1st 0.451361867 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G75250.1     MASNSRS--SISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILV
pt018851_POPTR_ MASSSVSSRGSGSWTAQQNKAFERALAVYDRDTPDRWHNVARAVGGKTAEEVKRHYEILV
pt000040_POPTR_ MAYFTSSHGSSSSWTPKQNKLFEKALAVYDKDTPDRWQNVAKAVGGKSAEEVKMHYDRLV
                **  : *  . ..** .*** **:******:******:***:*****:.**** **: **

AT1G75250.1     EDLINIETGRVPLPNYKTFESNSRSINDFDTRYITKYLYMMLSIYFDNHSSDFEKFSQKV
pt018851_POPTR_ EDVKHIESGRVPFPNYRTTGANGHS-----------------------------KTGEEK
pt000040_POPTR_ EDLTYIESGQAPLPNYKPSGSNST------------------------------------
                **:  **:*:.*:***:.  :*.                                     

AT1G75250.1     LVSYISLV
pt018851_POPTR_ MMKNMKLQ
pt000040_POPTR_ --------
BoxShade v3.31 C (beta, 970507) Output
AT1G75250.1     M A S N S R S - - S I S P W T F S Q N K M F E R A L A V Y D K D T P D R W H N V A K A V G G K T V E E V K R H Y D I L V
pt018851_POPTR_    M A S S S V S S R G S G S W T A Q Q N K A F E R A L A V Y D R D T P D R W H N V A R A V G G K T A E E V K R H Y E I L V
pt000040_POPTR_    M A Y F T S S H G S S S S W T P K Q N K L F E K A L A V Y D K D T P D R W Q N V A K A V G G K S A E E V K M H Y D R L V
 
AT1G75250.1     E D L I N I E T G R V P L P N Y K T F E S N S R S I N D F D T R Y I T K Y L Y M M L S I Y F D N H S S D F E K F S Q K V
pt018851_POPTR_    E D V K H I E S G R V P F P N Y R T T G A N G H S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - K T G E E K
pt000040_POPTR_    E D L T Y I E S G Q A P L P N Y K P S G S N S T - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT1G75250.1     L V S Y I S L V
pt018851_POPTR_    M M K N M K L Q
pt000040_POPTR_    - - - - - - - -
 
0