fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G75250.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb033118 not found in 238aa AT1G75250.1 1st_1st 0.385214007 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G75250.1     -MAS-----------NSRSSISP--------WTFSQNKMF--------------------
Sb033118_Sorbi1 FLLSHHYLQLQLGPLHACCPINPIYTHVCIFWIIDRSSYYVHHLRRSSDVSACMSGGPVA
                 : *           :: ..*.*        * :.:.. :                    

AT1G75250.1     -------ERALAVYDKD---------TPDRWHNVAKAVG-GKTVEEVKRHYDI----LVE
Sb033118_Sorbi1 GGAAVGREGHLAGLDVADVLLQQVVVAPDVLGGLAAADGAGDVVPPVRRVLVVNGQRLLE
                       *  **  *           :**   .:* * * *..*  *:*   :    *:*

AT1G75250.1     DLINIETGRVPLPNYKTFESNSRSINDFDTRYITKYLYMMLSIYFDNHSSDFEKFSQKVL
Sb033118_Sorbi1 QLVLL---RRPL----------------RARRCARH-----------------RLHRRHS
                :*: :   * **                 :*  :::                 :: ::  

AT1G75250.1     VSYISLV-----
Sb033118_Sorbi1 VAFLELAREEGS
                *:::.*.
BoxShade v3.31 C (beta, 970507) Output
AT1G75250.1     - M A S - - - - - - - - - - - N S R S S I S P - - - - - - - - W T F S Q N K M F - - - - - - - - - - - - - - - - - - - -
Sb033118_Sorbi1    F L L S H H Y L Q L Q L G P L H A C C P I N P I Y T H V C I F W I I D R S S Y Y V H H L R R S S D V S A C M S G G P V A
 
AT1G75250.1     - - - - - - - E R A L A V Y D K D - - - - - - - - - T P D R W H N V A K A V G - G K T V E E V K R H Y D I - - - - L V E
Sb033118_Sorbi1    G G A A V G R E G H L A G L D V A D V L L Q Q V V V A P D V L G G L A A A D G A G D V V P P V R R V L V V N G Q R L L E
 
AT1G75250.1     D L I N I E T G R V P L P N Y K T F E S N S R S I N D F D T R Y I T K Y L Y M M L S I Y F D N H S S D F E K F S Q K V L
Sb033118_Sorbi1    Q L V L L - - - R R P L - - - - - - - - - - - - - - - - R A R R C A R H - - - - - - - - - - - - - - - - - R L H R R H S
 
AT1G75250.1     V S Y I S L V - - - - -
Sb033118_Sorbi1    V A F L E L A R E E G S
 
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