fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G75250.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt018851 not found in 99aa AT4G39250.1 1st_not 0.474708171 II
Pt038744 not found in 99aa AT1G75250.2 not_not 0.466926070 III
Pt021017 not found in 87aa AT2G21650.1 not_not 0.455252918 III
Pt000040 not found in 84aa AT1G75250.1 not_1st 0.451361867 II
Pt000491 not found in 85aa AT4G39250.1 not_not 0.447470817 III
Pt037449 not found in 78aa AT4G39250.1 not_not 0.443579766 III
Pt019385 not found in 100aa AT1G19510.1 not_not 0.428015564 III
Pt022324 not found in 113aa AT4G39250.1 not_not 0.416342412 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G75250.1     MAS----NSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGG-KTVEEVKRHYD
pt000040_POPTR_ MAYFT--SSHGSSSSWTPKQNKLFEKALAVYDKDTPDRWQNVAKAVGG-KSAEEVKMHYD
pt037449_POPTR_ MSSNSL-------TSWTPKQNKLFEKALALHDKDTPDRWHNVAKAVGG-KSAEEVKRHYE
pt018851_POPTR_ MASSSV-SSRG-SGSWTAQQNKAFERALAVYDRDTPDRWHNVARAVGG-KTAEEVKRHYE
pt022324_POPTR_ MSSSYQ-ASRNSRSAWTPRENKLFEKALALFDKDTPDRWQNIAKAVGGVKSAEEVKKHYE
pt038744_POPTR_ MSYFT--SSNGSGSSWTAKQNKLFEKALAVYDKDTPDRWQNVAKAVGG-KSPEEVKRHYD
pt019385_POPTR_ MSSSHQ-TPRNSSSSWTPRENKLFEKALALFDKDTPDRWQNIAKAVGGVKSAEEMKRHYE
pt000491_POPTR_ MASNSLNSSRNCSSSWTPKQNKLFEKALALYDKDTPDRWHNVAKAVGG-KSAEEVERHYE
pt021017_POPTR_ MASSSM-SSRG-SGSWTVQQNKAFERALAVYDRDTPDRWYNVARAVGG-KTAEEVKRHYE
                *:            .**  :** **:***:.*:****** *:*:**** *: **:: **:

AT1G75250.1     ILVEDLINIETGRVPLPNYKTFESNSRSINDF----DTRYITKYLYMMLSIYFDNHSSDF
pt000040_POPTR_ RLVEDLTYIESGQAPLPNYKPSGSNST---------------------------------
pt037449_POPTR_ ILIKDVREIESGRVPFPNYRSSG-NGN---------------------------------
pt018851_POPTR_ ILVEDVKHIESGRVPFPNYRTTGANGHSKTGE------EKMMKNMKLQ------------
pt022324_POPTR_ ILIEDLQHIESGRIPIPKYKSSGSCNNTNEEESEVQDSDRLPIYVCGKW-----------
pt038744_POPTR_ RLVEDLVYIESGQAPLPNYKPSGSNGRGLVEE------QRLTRNLKLQ------------
pt019385_POPTR_ ILIEDLKHIESGRVPIPNYKSSRSYSNTNEEE-------RLLKYVKLQ------------
pt000491_POPTR_ ILIKDVREIESGRVPFPNYRSSG-NSN---------------------------------
pt021017_POPTR_ LLVEDVKHIESGHVPFPNYRTTGANGHARG------------------------------
                 *::*:  **:*: *:*:*:.    .                                  

AT1G75250.1     EKFSQKVLVSYISLV
pt000040_POPTR_ ---------------
pt037449_POPTR_ ---------------
pt018851_POPTR_ ---------------
pt022324_POPTR_ ------MLLSS----
pt038744_POPTR_ ---------------
pt019385_POPTR_ ---------------
pt000491_POPTR_ ---------------
pt021017_POPTR_ ---------------
BoxShade v3.31 C (beta, 970507) Output
AT1G75250.1     M A S - - - - N S R S S I S P W T F S Q N K M F E R A L A V Y D K D T P D R W H N V A K A V G G - K T V E E V K R H Y D
pt000040_POPTR_    M A Y F T - - S S H G S S S S W T P K Q N K L F E K A L A V Y D K D T P D R W Q N V A K A V G G - K S A E E V K M H Y D
pt037449_POPTR_    M S S N S L - - - - - - - T S W T P K Q N K L F E K A L A L H D K D T P D R W H N V A K A V G G - K S A E E V K R H Y E
pt018851_POPTR_    M A S S S V - S S R G - S G S W T A Q Q N K A F E R A L A V Y D R D T P D R W H N V A R A V G G - K T A E E V K R H Y E
pt022324_POPTR_    M S S S Y Q - A S R N S R S A W T P R E N K L F E K A L A L F D K D T P D R W Q N I A K A V G G V K S A E E V K K H Y E
pt038744_POPTR_    M S Y F T - - S S N G S G S S W T A K Q N K L F E K A L A V Y D K D T P D R W Q N V A K A V G G - K S P E E V K R H Y D
pt019385_POPTR_    M S S S H Q - T P R N S S S S W T P R E N K L F E K A L A L F D K D T P D R W Q N I A K A V G G V K S A E E M K R H Y E
pt000491_POPTR_    M A S N S L N S S R N C S S S W T P K Q N K L F E K A L A L Y D K D T P D R W H N V A K A V G G - K S A E E V E R H Y E
pt021017_POPTR_    M A S S S M - S S R G - S G S W T V Q Q N K A F E R A L A V Y D R D T P D R W Y N V A R A V G G - K T A E E V K R H Y E
 
AT1G75250.1     I L V E D L I N I E T G R V P L P N Y K T F E S N S R S I N D F - - - - D T R Y I T K Y L Y M M L S I Y F D N H S S D F
pt000040_POPTR_    R L V E D L T Y I E S G Q A P L P N Y K P S G S N S T - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt037449_POPTR_    I L I K D V R E I E S G R V P F P N Y R S S G - N G N - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt018851_POPTR_    I L V E D V K H I E S G R V P F P N Y R T T G A N G H S K T G E - - - - - - E K M M K N M K L Q - - - - - - - - - - - -
pt022324_POPTR_    I L I E D L Q H I E S G R I P I P K Y K S S G S C N N T N E E E S E V Q D S D R L P I Y V C G K W - - - - - - - - - - -
pt038744_POPTR_    R L V E D L V Y I E S G Q A P L P N Y K P S G S N G R G L V E E - - - - - - Q R L T R N L K L Q - - - - - - - - - - - -
pt019385_POPTR_    I L I E D L K H I E S G R V P I P N Y K S S R S Y S N T N E E E - - - - - - - R L L K Y V K L Q - - - - - - - - - - - -
pt000491_POPTR_    I L I K D V R E I E S G R V P F P N Y R S S G - N S N - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt021017_POPTR_    L L V E D V K H I E S G H V P F P N Y R T T G A N G H A R G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT1G75250.1     E K F S Q K V L V S Y I S L V
pt000040_POPTR_    - - - - - - - - - - - - - - -
pt037449_POPTR_    - - - - - - - - - - - - - - -
pt018851_POPTR_    - - - - - - - - - - - - - - -
pt022324_POPTR_    - - - - - - M L L S S - - - -
pt038744_POPTR_    - - - - - - - - - - - - - - -
pt019385_POPTR_    - - - - - - - - - - - - - - -
pt000491_POPTR_    - - - - - - - - - - - - - - -
pt021017_POPTR_    - - - - - - - - - - - - - - -
 
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