fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G75250.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm005042 not found in 105aa AT1G75250.1 1st_1st 0.459143968 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G75250.1     MASNSRSS----ISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDI
gm005042_Glyma0 MASNSHNNNKEIFSSWTRMQNKQFESALALYDQDTPDRWQNIAKVVGDKSAEEVKRHYEI
                *****:..    :*.**  *** ** ***:**:******:*:**.**.*:.*******:*

AT1G75250.1     LVEDLINIETGRVPLPNYKTFESNS-RSINDFDTRYITKYLYMMLSIYFDNHSSDFEKFS
gm005042_Glyma0 LLEDLRHIESGRVPIPSYKSTDNNQEREMNAKDCNKKTTYLYL------KN---------
                *:*** :**:****:*.**: :.*. *.:*  * .  *.***:      .*         

AT1G75250.1     QKVLVSYISLV
gm005042_Glyma0 -----------
BoxShade v3.31 C (beta, 970507) Output
AT1G75250.1     M A S N S R S S - - - - I S P W T F S Q N K M F E R A L A V Y D K D T P D R W H N V A K A V G G K T V E E V K R H Y D I
gm005042_Glyma0    M A S N S H N N N K E I F S S W T R M Q N K Q F E S A L A L Y D Q D T P D R W Q N I A K V V G D K S A E E V K R H Y E I
 
AT1G75250.1     L V E D L I N I E T G R V P L P N Y K T F E S N S - R S I N D F D T R Y I T K Y L Y M M L S I Y F D N H S S D F E K F S
gm005042_Glyma0    L L E D L R H I E S G R V P I P S Y K S T D N N Q E R E M N A K D C N K K T T Y L Y L - - - - - - K N - - - - - - - - -
 
AT1G75250.1     Q K V L V S Y I S L V
gm005042_Glyma0    - - - - - - - - - - -
 
0