fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G75490.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm008711 not found in 214aa AT1G75490.1 1st_1st 0.483050847 Ia
Pt040576 not found in 240aa AT1G75490.1 1st_1st 0.449152542 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G75490.1     MSSIEPKVMMVGANKK---QRTVQASSRKGCMRGKGGPDNASCTYKGVRQRTWGKWVAEI
gm008711_Glyma0 ML----KSGI-GIEERKQLKKPAQASSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEI
pt040576_POPTR_ MS----KSIMSGFGEKKQFKKPEQASSRKGCMRGKGGPENALCTYKGVRQRTWGKWVAEI
                *     *  : *  ::   ::. ***************:** ******************

AT1G75490.1     REPNRGARLWLGTFDTSREAALAYDSAARKLYGPEAHLNLPE-SLRS---YPKTASSPAS
gm008711_Glyma0 REPNRGARLWLGTFETSHEAALAYDAAARKLYGSDAKLNLPELSIKSQSQCPPPSPPPPS
pt040576_POPTR_ REPNRGARLWLGTYDTSHEAAMAYDAAARKLYGPEAKLNLPELQVNS-SQF--PASPANS
                *************::**:***:***:*******.:*:***** .:.*      .:... *

AT1G75490.1     QT---TPSSNTGG-----------------KSSSDSESP---------CSSNE-MSSCG-
gm008711_Glyma0 SVTNNTQMENLQQ--IQNN-----YIDMATRLELDQFTP---------------------
pt040576_POPTR_ QV---IQMTNQPSHLIQNSSPTSTYSSNIPNMESNEAKPILYNHNPIMSFSNESVDSNGM
                ..       *                    . . :. .*                     

AT1G75490.1     RVTEEI----SW-------EHINVDLPVMDDSSIWEEATMSLGFPWVHEGDNDISRFDTC
gm008711_Glyma0 PVENEVEFRPSW-------ATMNEGLPVFDD-SIWAEAAMSLDFPHIAA--------ETA
pt040576_POPTR_ EVENDANFGRSGDVIKEFSANLNVNM-TFND-SIWAEAALSINFP-VMD--------DPG
                 * ::     *          :* .: .::* *** **::*:.** :          :. 

AT1G75490.1     ISGGYSN------WDSFHSPL--
gm008711_Glyma0 IYASGNNLADVGVWDSLQTPWCM
pt040576_POPTR_ IFAS--NLMEESGGDTMQTPWCM
                * ..  *       *::::*
BoxShade v3.31 C (beta, 970507) Output
AT1G75490.1     M S S I E P K V M M V G A N K K - - - Q R T V Q A S S R K G C M R G K G G P D N A S C T Y K G V R Q R T W G K W V A E I
gm008711_Glyma0    M L - - - - K S G I - G I E E R K Q L K K P A Q A S S R K G C M R G K G G P E N A S C T Y K G V R Q R T W G K W V A E I
pt040576_POPTR_    M S - - - - K S I M S G F G E K K Q F K K P E Q A S S R K G C M R G K G G P E N A L C T Y K G V R Q R T W G K W V A E I
 
AT1G75490.1     R E P N R G A R L W L G T F D T S R E A A L A Y D S A A R K L Y G P E A H L N L P E - S L R S - - - Y P K T A S S P A S
gm008711_Glyma0    R E P N R G A R L W L G T F E T S H E A A L A Y D A A A R K L Y G S D A K L N L P E L S I K S Q S Q C P P P S P P P P S
pt040576_POPTR_    R E P N R G A R L W L G T Y D T S H E A A M A Y D A A A R K L Y G P E A K L N L P E L Q V N S - S Q F - - P A S P A N S
 
AT1G75490.1     Q T - - - T P S S N T G G - - - - - - - - - - - - - - - - - K S S S D S E S P - - - - - - - - - C S S N E - M S S C G -
gm008711_Glyma0    S V T N N T Q M E N L Q Q - - I Q N N - - - - - Y I D M A T R L E L D Q F T P - - - - - - - - - - - - - - - - - - - - -
pt040576_POPTR_    Q V - - - I Q M T N Q P S H L I Q N S S P T S T Y S S N I P N M E S N E A K P I L Y N H N P I M S F S N E S V D S N G M
 
AT1G75490.1     R V T E E I - - - - S W - - - - - - - E H I N V D L P V M D D S S I W E E A T M S L G F P W V H E G D N D I S R F D T C
gm008711_Glyma0    P V E N E V E F R P S W - - - - - - - A T M N E G L P V F D D - S I W A E A A M S L D F P H I A A - - - - - - - - E T A
pt040576_POPTR_    E V E N D A N F G R S G D V I K E F S A N L N V N M - T F N D - S I W A E A A L S I N F P - V M D - - - - - - - - D P G
 
AT1G75490.1     I S G G Y S N - - - - - - W D S F H S P L - -
gm008711_Glyma0    I Y A S G N N L A D V G V W D S L Q T P W C M
pt040576_POPTR_    I F A S - - N L M E E S G G D T M Q T P W C M
 
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