fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G75490.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb016007 not found in 388aa AT1G75490.1 1st_1st 0.367231638 Ib
Sm009897 not found in 75aa AT1G75490.1 1st_1st 0.375706214 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G75490.1     MSSIEPKVMM-VGANKKQRT-----VQA--------------------------------
Sm009897_Selmo1 ------------------------------------------------------------
Sb016007_Sorbi1 ---MDRSVAMEVAEMQRQRQQFVHHLQVHHQQQGTTHHQPLLSSPPPHHQQQQNSGSSSR
                                                                            

AT1G75490.1     ------------SSRKGCMRGKGGPDNASCTYKGVRQRTWGKWVAEIREPNRGARLWLGT
Sm009897_Selmo1 -------------SKKGSMRGKGGPENASCTYRGVRQRTWGKWVAEIREPKKRSRLWLGS
Sb016007_Sorbi1 AGGGGRRCCPLRRSRKGCMKGKGGPDNQQCPYRGVRQRTWGKWVAEIREPNRGARLWLGT
                             *:**.*:*****:* .*.*:*****************:: :*****:

AT1G75490.1     FDTSREAALAYDSAARKLYGPEAHLNLPESLRSYPKTA-------------------SSP
Sm009897_Selmo1 FATADEAARAYDEAAKRLYGPEAHLNLP--------------------------------
Sb016007_Sorbi1 FGSALEAARAYDNAARQLYGDCARLNLQQMPVPPPSAAAAGGGGGGGGGGAAAVVVSSAP
                * :: *** ***.**::***  *:***                                 

AT1G75490.1     ASQTTPSSNTGG------------------------------------------KSSSDS
Sm009897_Selmo1 ------------------------------------------------------------
Sb016007_Sorbi1 SPDAVAAAGPGGGGGGGHNRHHQYLQQQQQQQAAMASSAPIMMMQYSASSYSADASSSNS
                                                                            

AT1G75490.1     E----------------SPCSSN-------EM----SSCGRVTEEISWEHINVDLPVMDD
Sm009897_Selmo1 ------------------------------------------------------------
Sb016007_Sorbi1 DSFSNSYSSSSPVTMAPSPTTNNYNHHQTFQMTPPPSSCGVVMAPAAAPQAQQGCHVDDT
                                                                            

AT1G75490.1     SSIWEEATMSL----------GFPWVHEGDNDISRFDTCISG-------GYSN-------
Sm009897_Selmo1 ------------------------------------------------------------
Sb016007_Sorbi1 TT----TTLAMQHQQMIRELAAVPLHQEADDDFEDFMTRLPKAEDFGLQGFQEVPPEVFD
                                                                            

AT1G75490.1     -----WD----SFHSPL------------------
Sm009897_Selmo1 -----------------------------------
Sb016007_Sorbi1 EAAGIWDHTAAAWSTPATMMTIDSAAGAAHQHQQQ
BoxShade v3.31 C (beta, 970507) Output
AT1G75490.1     M S S I E P K V M M - V G A N K K Q R T - - - - - V Q A - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sm009897_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb016007_Sorbi1    - - - M D R S V A M E V A E M Q R Q R Q Q F V H H L Q V H H Q Q Q G T T H H Q P L L S S P P P H H Q Q Q Q N S G S S S R
 
AT1G75490.1     - - - - - - - - - - - - S S R K G C M R G K G G P D N A S C T Y K G V R Q R T W G K W V A E I R E P N R G A R L W L G T
Sm009897_Selmo1    - - - - - - - - - - - - - S K K G S M R G K G G P E N A S C T Y R G V R Q R T W G K W V A E I R E P K K R S R L W L G S
Sb016007_Sorbi1    A G G G G R R C C P L R R S R K G C M K G K G G P D N Q Q C P Y R G V R Q R T W G K W V A E I R E P N R G A R L W L G T
 
AT1G75490.1     F D T S R E A A L A Y D S A A R K L Y G P E A H L N L P E S L R S Y P K T A - - - - - - - - - - - - - - - - - - - S S P
Sm009897_Selmo1    F A T A D E A A R A Y D E A A K R L Y G P E A H L N L P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb016007_Sorbi1    F G S A L E A A R A Y D N A A R Q L Y G D C A R L N L Q Q M P V P P P S A A A A G G G G G G G G G G A A A V V V S S A P
 
AT1G75490.1     A S Q T T P S S N T G G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - K S S S D S
Sm009897_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb016007_Sorbi1    S P D A V A A A G P G G G G G G G H N R H H Q Y L Q Q Q Q Q Q Q A A M A S S A P I M M M Q Y S A S S Y S A D A S S S N S
 
AT1G75490.1     E - - - - - - - - - - - - - - - - S P C S S N - - - - - - - E M - - - - S S C G R V T E E I S W E H I N V D L P V M D D
Sm009897_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb016007_Sorbi1    D S F S N S Y S S S S P V T M A P S P T T N N Y N H H Q T F Q M T P P P S S C G V V M A P A A A P Q A Q Q G C H V D D T
 
AT1G75490.1     S S I W E E A T M S L - - - - - - - - - - G F P W V H E G D N D I S R F D T C I S G - - - - - - - G Y S N - - - - - - -
Sm009897_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb016007_Sorbi1    T T - - - - T T L A M Q H Q Q M I R E L A A V P L H Q E A D D D F E D F M T R L P K A E D F G L Q G F Q E V P P E V F D
 
AT1G75490.1     - - - - - W D - - - - S F H S P L - - - - - - - - - - - - - - - - - -
Sm009897_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb016007_Sorbi1    E A A G I W D H T A A A W S T P A T M M T I D S A A G A A H Q H Q Q Q
 
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