fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G75490.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt040576 not found in 240aa AT1G75490.1 1st_1st 0.449152542 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G75490.1     MSSIEPKVMMVG-ANKKQ--RTVQASSRKGCMRGKGGPDNASCTYKGVRQRTWGKWVAEI
pt040576_POPTR_ MS----KSIMSGFGEKKQFKKPEQASSRKGCMRGKGGPENALCTYKGVRQRTWGKWVAEI
                **    * :* * .:***  :. ***************:** ******************

AT1G75490.1     REPNRGARLWLGTFDTSREAALAYDSAARKLYGPEAHLNLPESLRSYPKTASSPASQ---
pt040576_POPTR_ REPNRGARLWLGTYDTSHEAAMAYDAAARKLYGPEAKLNLPELQVNSSQFPASPANSQVI
                *************:***:***:***:**********:*****   . .: .:***..   

AT1G75490.1     ----------------TTPSSNTGGKSSSD--------------SESPCSSNEMS-----
pt040576_POPTR_ QMTNQPSHLIQNSSPTSTYSSNIPNMESNEAKPILYNHNPIMSFSNESVDSNGMEVENDA
                                :* ***  . .*.:              *:.. .** *.     

AT1G75490.1     ---SCGRVTEEISWEHINVDLPVMDDSSIWEEATMSLGFPWVHEGDNDISRFDTCI---S
pt040576_POPTR_ NFGRSGDVIKEFS-ANLNVNMTFND--SIWAEAALSINFPVM----DDPGIFASNLMEES
                    .* * :*:*  ::**::.. *  *** **::*:.** :    :* . * : :   *

AT1G75490.1     GGYSNWDSFHSPL--
pt040576_POPTR_ GG----DTMQTPWCM
                **    *::::*
BoxShade v3.31 C (beta, 970507) Output
AT1G75490.1     M S S I E P K V M M V G - A N K K Q - - R T V Q A S S R K G C M R G K G G P D N A S C T Y K G V R Q R T W G K W V A E I
pt040576_POPTR_    M S - - - - K S I M S G F G E K K Q F K K P E Q A S S R K G C M R G K G G P E N A L C T Y K G V R Q R T W G K W V A E I
 
AT1G75490.1     R E P N R G A R L W L G T F D T S R E A A L A Y D S A A R K L Y G P E A H L N L P E S L R S Y P K T A S S P A S Q - - -
pt040576_POPTR_    R E P N R G A R L W L G T Y D T S H E A A M A Y D A A A R K L Y G P E A K L N L P E L Q V N S S Q F P A S P A N S Q V I
 
AT1G75490.1     - - - - - - - - - - - - - - - - T T P S S N T G G K S S S D - - - - - - - - - - - - - - S E S P C S S N E M S - - - - -
pt040576_POPTR_    Q M T N Q P S H L I Q N S S P T S T Y S S N I P N M E S N E A K P I L Y N H N P I M S F S N E S V D S N G M E V E N D A
 
AT1G75490.1     - - - S C G R V T E E I S W E H I N V D L P V M D D S S I W E E A T M S L G F P W V H E G D N D I S R F D T C I - - - S
pt040576_POPTR_    N F G R S G D V I K E F S - A N L N V N M T F N D - - S I W A E A A L S I N F P V M - - - - D D P G I F A S N L M E E S
 
AT1G75490.1     G G Y S N W D S F H S P L - -
pt040576_POPTR_    G G - - - - D T M Q T P W C M
 
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