fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G75490.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt040576 not found in 240aa AT1G75490.1 1st_1st 0.449152542 Ia
Pt002500 not found in 244aa AT1G75490.1 not_1st 0.449152542 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G75490.1     MSSIEPKVMMVGANKKQ--RTVQASSRKGCMRGKGGPDNASCTYKGVRQRTWGKWVAEIR
pt002500_POPTR_ MGGMSKSTTSGFGEKKQFKKPAQASSRKGCMRGKGGPENALCTYKGVRQRTWGKWVAEIR
pt040576_POPTR_ ---MSKSIMSGFGEKKQFKKPEQASSRKGCMRGKGGPENALCTYKGVRQRTWGKWVAEIR
                   :. .     .:***  :. ***************:** *******************

AT1G75490.1     EPNRGARLWLGTFDTSREAALAYDSAARKLYGPEAHLNLPESLRSYPKTASSPA-SQTTP
pt002500_POPTR_ EPNRGARLWLGTFDTSHEAATAYDAAARKLYGPEAKLNLPELQVNNCQFPASPANSQVTQ
pt040576_POPTR_ EPNRGARLWLGTYDTSHEAAMAYDAAARKLYGPEAKLNLPELQVNSSQFPASPANSQVIQ
                ************:***:*** ***:**********:*****   .  : .:*** **.  

AT1G75490.1     ------------SSNTGGKSSS---------------------------DSESPCSSNEM
pt002500_POPTR_ MTYQPCQIIHNCSSTTSTCSSNTPSIESIEMTPMLYNHDPIMYFSNESVDSDGKGAVNEV
pt040576_POPTR_ MTNQPSHLIQN-SSPTSTYSSNIPNMESNEAKPILYNHNPIMSFSNESVDSNGMEVENDA
                            ** *.  **.                           **:.    *: 

AT1G75490.1     SSCGRVTEEIS--WEHINVDLPVMDDSSIWEEATMSLGFPWVHEGDNDISRFDTCISGGY
pt002500_POPTR_ NF-GRSEVEIKEFWSNFNVNIPF--DDSIWVEAAMSINFPVV----EDPGIFASNLMEG-
pt040576_POPTR_ NF-GRSGDVIKEFSANLNVNMTF--NDSIWAEAALSINFPVM----DDPGIFASNLMEE-
                .  **    *.    ::**::..  :.*** **::*:.** :    :* . * : :    

AT1G75490.1     SNWDSFHSPL--
pt002500_POPTR_ TGRDTLQTPWCM
pt040576_POPTR_ SGGDTMQTPWCM
                :. *::::*
BoxShade v3.31 C (beta, 970507) Output
AT1G75490.1     M S S I E P K V M M V G A N K K Q - - R T V Q A S S R K G C M R G K G G P D N A S C T Y K G V R Q R T W G K W V A E I R
pt002500_POPTR_    M G G M S K S T T S G F G E K K Q F K K P A Q A S S R K G C M R G K G G P E N A L C T Y K G V R Q R T W G K W V A E I R
pt040576_POPTR_    - - - M S K S I M S G F G E K K Q F K K P E Q A S S R K G C M R G K G G P E N A L C T Y K G V R Q R T W G K W V A E I R
 
AT1G75490.1     E P N R G A R L W L G T F D T S R E A A L A Y D S A A R K L Y G P E A H L N L P E S L R S Y P K T A S S P A - S Q T T P
pt002500_POPTR_    E P N R G A R L W L G T F D T S H E A A T A Y D A A A R K L Y G P E A K L N L P E L Q V N N C Q F P A S P A N S Q V T Q
pt040576_POPTR_    E P N R G A R L W L G T Y D T S H E A A M A Y D A A A R K L Y G P E A K L N L P E L Q V N S S Q F P A S P A N S Q V I Q
 
AT1G75490.1     - - - - - - - - - - - - S S N T G G K S S S - - - - - - - - - - - - - - - - - - - - - - - - - - - D S E S P C S S N E M
pt002500_POPTR_    M T Y Q P C Q I I H N C S S T T S T C S S N T P S I E S I E M T P M L Y N H D P I M Y F S N E S V D S D G K G A V N E V
pt040576_POPTR_    M T N Q P S H L I Q N - S S P T S T Y S S N I P N M E S N E A K P I L Y N H N P I M S F S N E S V D S N G M E V E N D A
 
AT1G75490.1     S S C G R V T E E I S - - W E H I N V D L P V M D D S S I W E E A T M S L G F P W V H E G D N D I S R F D T C I S G G Y
pt002500_POPTR_    N F - G R S E V E I K E F W S N F N V N I P F - - D D S I W V E A A M S I N F P V V - - - - E D P G I F A S N L M E G -
pt040576_POPTR_    N F - G R S G D V I K E F S A N L N V N M T F - - N D S I W A E A A L S I N F P V M - - - - D D P G I F A S N L M E E -
 
AT1G75490.1     S N W D S F H S P L - -
pt002500_POPTR_    T G R D T L Q T P W C M
pt040576_POPTR_    S G G D T M Q T P W C M
 
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