fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G75490.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm048119 not found in 240aa AT1G75490.1 not_1st 0.457627118 II
Gm039222 not found in 283aa AT1G75490.1 not_1st 0.449152542 II
Gm013905 not found in 249aa AT1G75490.1 not_1st 0.443502824 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G75490.1     MSSIEPKVMMVGANKK-QRTVQASSRKGCMRGKGGPDNASCTYKGVRQRTWGKWVAEIRE
gm013905_Glyma0 ---MLKSGMGIEERKQVKKPAQASSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIRE
gm048119_Glyma1 --------MGIQERKKVKKPAQASSRKGCMRGKGGPENATCTYKGVRQRTWGKWVAEIRE
gm039222_Glyma1 --------MGIQERKKVKKPAQASSRKGCMRGKGGPENAKCTYKGVRQRTWGKWVAEIRE
                        * :  .*: ::..***************:**.********************

AT1G75490.1     PNRGARLWLGTFDTSREAALAYDSAARKLYGPEAHLNLPE-SLRSYPKTASSPAS-----
gm013905_Glyma0 PNRGARLWLGTFETSHEAALAYDAAARKLYGSDAKLNLPELSIKSQSQCPPPPSSVSNNT
gm048119_Glyma1 PNRGARLWLGTFDTAREAALAYDAAARKLYGPDAKLNLPELSVPYAA-GVMNPSHMQQQQ
gm039222_Glyma1 PNRGARLWLGTFDTAREAALAYDAAARKLYGPDAKLNLAELSVPAPALAAVNPSHMQQQP
                ************:*::*******:*******.:*:***.* *:   .     *:      

AT1G75490.1     -----------------------------------QTTPSSNTGGKSSS-----------
gm013905_Glyma0 Q-IPQMENLQQQIQ----NNYMDMATCSNNFNNN-TNNPSEV-SMASQQ-VGVGVPIYTS
gm048119_Glyma1 Q-------QQQQPQ----------HQHP-------QQQP-----------RDAAAPVYTS
gm039222_Glyma1 QVVPEMLIQQQQPLVHPTFDLVNVTSHPSGFNNILNNNPVVVSSMASSFLADAAVPVYTS
                                                      *                     

AT1G75490.1     -DS--ESPCSSNEMSSCGRVTEEI--------------------SWE-HINVDLPVMDDS
gm013905_Glyma0 -DSIVSLPL------DTNPKP------------VENDGD--FRPSWG-TMNEGLPVFDD-
gm048119_Glyma1 CDSIVSLPLSATNYTTNNTVPMEMDGYYYSSIAVESKEDDMFRPFWGPTMDDTMPVSDE-
gm039222_Glyma1 CDSILSLPSATTNYTNTNTVPMEMENYSSSIPTVESNGDNMFRSFWGPTMDDTMPVFDQ-
                 **  . *         .  .                        *   ::  :** *: 

AT1G75490.1     SIWEEATMSLGFPWV---------HEGDND-ISRFDTCISGGYSNWDSFHSPL---
gm013905_Glyma0 SIWAEAAMSLDFPQIAAETAIY--SSGNN----------LADVGVWDSLQTP-WCM
gm048119_Glyma1 SIWTEAAMSLDYP-IVGGGG----GFGNNR---KF---FFGEATAWDSLQTPSFCM
gm039222_Glyma1 SIWTEAAMSLDLP-IIADNGFYGRGVGGNKGGGNF---FLDEVAAWDSLHTPSCCM
                *** **:***. * :           *.*                ***:::*
BoxShade v3.31 C (beta, 970507) Output
AT1G75490.1     M S S I E P K V M M V G A N K K - Q R T V Q A S S R K G C M R G K G G P D N A S C T Y K G V R Q R T W G K W V A E I R E
gm013905_Glyma0    - - - M L K S G M G I E E R K Q V K K P A Q A S S R K G C M R G K G G P E N A S C T Y K G V R Q R T W G K W V A E I R E
gm048119_Glyma1    - - - - - - - - M G I Q E R K K V K K P A Q A S S R K G C M R G K G G P E N A T C T Y K G V R Q R T W G K W V A E I R E
gm039222_Glyma1    - - - - - - - - M G I Q E R K K V K K P A Q A S S R K G C M R G K G G P E N A K C T Y K G V R Q R T W G K W V A E I R E
 
AT1G75490.1     P N R G A R L W L G T F D T S R E A A L A Y D S A A R K L Y G P E A H L N L P E - S L R S Y P K T A S S P A S - - - - -
gm013905_Glyma0    P N R G A R L W L G T F E T S H E A A L A Y D A A A R K L Y G S D A K L N L P E L S I K S Q S Q C P P P P S S V S N N T
gm048119_Glyma1    P N R G A R L W L G T F D T A R E A A L A Y D A A A R K L Y G P D A K L N L P E L S V P Y A A - G V M N P S H M Q Q Q Q
gm039222_Glyma1    P N R G A R L W L G T F D T A R E A A L A Y D A A A R K L Y G P D A K L N L A E L S V P A P A L A A V N P S H M Q Q Q P
 
AT1G75490.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Q T T P S S N T G G K S S S - - - - - - - - - - -
gm013905_Glyma0    Q - I P Q M E N L Q Q Q I Q - - - - N N Y M D M A T C S N N F N N N - T N N P S E V - S M A S Q Q - V G V G V P I Y T S
gm048119_Glyma1    Q - - - - - - - Q Q Q Q P Q - - - - - - - - - - H Q H P - - - - - - - Q Q Q P - - - - - - - - - - - R D A A A P V Y T S
gm039222_Glyma1    Q V V P E M L I Q Q Q Q P L V H P T F D L V N V T S H P S G F N N I L N N N P V V V S S M A S S F L A D A A V P V Y T S
 
AT1G75490.1     - D S - - E S P C S S N E M S S C G R V T E E I - - - - - - - - - - - - - - - - - - - - S W E - H I N V D L P V M D D S
gm013905_Glyma0    - D S I V S L P L - - - - - - D T N P K P - - - - - - - - - - - - V E N D G D - - F R P S W G - T M N E G L P V F D D -
gm048119_Glyma1    C D S I V S L P L S A T N Y T T N N T V P M E M D G Y Y Y S S I A V E S K E D D M F R P F W G P T M D D T M P V S D E -
gm039222_Glyma1    C D S I L S L P S A T T N Y T N T N T V P M E M E N Y S S S I P T V E S N G D N M F R S F W G P T M D D T M P V F D Q -
 
AT1G75490.1     S I W E E A T M S L G F P W V - - - - - - - - - H E G D N D - I S R F D T C I S G G Y S N W D S F H S P L - - -
gm013905_Glyma0    S I W A E A A M S L D F P Q I A A E T A I Y - - S S G N N - - - - - - - - - - L A D V G V W D S L Q T P - W C M
gm048119_Glyma1    S I W T E A A M S L D Y P - I V G G G G - - - - G F G N N R - - - K F - - - F F G E A T A W D S L Q T P S F C M
gm039222_Glyma1    S I W T E A A M S L D L P - I I A D N G F Y G R G V G G N K G G G N F - - - F L D E V A A W D S L H T P S C C M
 
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