fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G75540.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm040650 not found in 276aa AT1G75540.1 not_1st 0.400359066 II
Pt002588 not found in 311aa AT1G75540.1 not_1st 0.438061041 II
Pt038624 not found in 310aa AT1G75540.1 not_1st 0.432675044 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G75540.1     MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC
pt038624_POPTR_ MKIQCDVCNKEEASVFCTADEAALCDTCDHRVHHANKLASKHQRFSLLHPSSKN--FPIC
pt002588_POPTR_ MKIQCDVCSKEEASVFCTADEAALCDTCDHRVHHANKLASKHQRFSLLHPSSKN--FPIC
gm040650_Glyma1 MKIQCDVCNKHEASVFCTADEAALCDGCDHRVHHANKLASKHQRFSLLRPSHKQ--HPLC
                ***:****.*.***********:**. ***:*********** ***** ** .:   *:*

AT1G75540.1     DICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVYKPTSKS
pt038624_POPTR_ DICQEKRAFLFCQQDRAILCRECDGPIHTANEHTQKHNRFLLTGVKLSATSAVYISSSSV
pt002588_POPTR_ DICQDKRAFLFCQQDRAILCRDCDGPIHTANEHTQKHNRFLLTGVKLSATSAVYMSSSSS
gm040650_Glyma1 DICQERRAFTFCQQDRAILCKECDVSIHSANEHTLKHDRFLLTGVKLAASA---MLRSSQ
                ****:::*: **********::** .**:***** **:*********:*::      *. 

AT1G75540.1     SSSSSSNQDFSVPGSSI--------------------SNPPPLKKPLSAPPQSNKIQPFS
pt038624_POPTR_ TNSGGD----LVPDSKSQQQQQQQQSIKKPVFDAPVNSNPPTVPSTLSTNTEVNK-----
pt002588_POPTR_ VTSSGD----LVPDSKSQKQQQQQL-IKKPVSVAPVNSNPPAVPSTLSANTVINK-----
gm040650_Glyma1 TTSDSN----STP--------------------SLLNVSHQTTPLPSSTTTTTTN-----
                 .*...     .*                         .  .   . *: .  .:     

AT1G75540.1     KINGGDASVNQWG----STSTISEYLMDTLPGWHVEDFLD-SSLPTYGFSKSGDDDGVLP
pt038624_POPTR_ ---GGDNLVTNEGFGSTTSSTISEYLMETLPGWHVEDFLD-SSTTPFGFCKI--DDGLLP
pt002588_POPTR_ ---DGDNLVTSEGFGSTTSSTISEYLMETLPGWHVEEFLDSSSTTPFGFSKI--DDGLLP
gm040650_Glyma1 ---NNNNKVAVEGTGSTSASSISEYLIETLPGWQVEDFLD-SYFVPFGFCK---NDEVLP
                   ..:  *   *    ::*:*****::*****:**:*** *   .:**.*   :* :**

AT1G75540.1     YMEPEDDNNTKRNNNNNNNNNNNTVSLPSKNLGIWVPQIPQTLPSSYPNQYFSQDNNIQF
pt038624_POPTR_ FMDAHD-------------LESNMSSFSSESLGLWVPQAPSTPY-TSQQYYY--------
pt002588_POPTR_ YMDTHD-------------LERNMSSFSSESLGLWVPQAPTPPLCTSQQYYY--------
gm040650_Glyma1 RLDA-D-------------VEGHMGSFSTENMGIWVPQAPPPLVCSSQM-----------
                 ::. *              : :  *:.::.:*:**** * .   :              

AT1G75540.1     GMYNKETSPEVVSFA------PIQNMKQQGQNNKRWYDDGGFTVPQITPPPLSSNKKFRS
pt038624_POPTR_ --------PQLVGQSGFKEIKETTNMKAN----RRLADD-VFTVPQISLPANISSKRSRP
pt002588_POPTR_ --------PQLVGQSGFKETKESTNMKAN----RRLTDD-AFTVPQISPPSNIGSKRSRP
gm040650_Glyma1 --------DRVIVQS-------ETNIKGSS--ISRLKDD-TFTVPQISPPSN--SKRARF
                         .::  :         *:* .     *  **  ******: *.   .*: * 

AT1G75540.1     FW
pt038624_POPTR_ LW
pt002588_POPTR_ LW
gm040650_Glyma1 LW
                :*
BoxShade v3.31 C (beta, 970507) Output
AT1G75540.1     M K I R C D V C D K E E A S V F C T A D E A S L C G G C D H Q V H H A N K L A S K H L R F S L L Y P S S S N T S S P L C
pt038624_POPTR_    M K I Q C D V C N K E E A S V F C T A D E A A L C D T C D H R V H H A N K L A S K H Q R F S L L H P S S K N - - F P I C
pt002588_POPTR_    M K I Q C D V C S K E E A S V F C T A D E A A L C D T C D H R V H H A N K L A S K H Q R F S L L H P S S K N - - F P I C
gm040650_Glyma1    M K I Q C D V C N K H E A S V F C T A D E A A L C D G C D H R V H H A N K L A S K H Q R F S L L R P S H K Q - - H P L C
 
AT1G75540.1     D I C Q D K K A L L F C Q Q D R A I L C K D C D S S I H A A N E H T K K H D R F L L T G V K L S A T S S V Y K P T S K S
pt038624_POPTR_    D I C Q E K R A F L F C Q Q D R A I L C R E C D G P I H T A N E H T Q K H N R F L L T G V K L S A T S A V Y I S S S S V
pt002588_POPTR_    D I C Q D K R A F L F C Q Q D R A I L C R D C D G P I H T A N E H T Q K H N R F L L T G V K L S A T S A V Y M S S S S S
gm040650_Glyma1    D I C Q E R R A F T F C Q Q D R A I L C K E C D V S I H S A N E H T L K H D R F L L T G V K L A A S A - - - M L R S S Q
 
AT1G75540.1     S S S S S S N Q D F S V P G S S I - - - - - - - - - - - - - - - - - - - - S N P P P L K K P L S A P P Q S N K I Q P F S
pt038624_POPTR_    T N S G G D - - - - L V P D S K S Q Q Q Q Q Q Q Q S I K K P V F D A P V N S N P P T V P S T L S T N T E V N K - - - - -
pt002588_POPTR_    V T S S G D - - - - L V P D S K S Q K Q Q Q Q Q L - I K K P V S V A P V N S N P P A V P S T L S A N T V I N K - - - - -
gm040650_Glyma1    T T S D S N - - - - S T P - - - - - - - - - - - - - - - - - - - - S L L N V S H Q T T P L P S S T T T T T T N - - - - -
 
AT1G75540.1     K I N G G D A S V N Q W G - - - - S T S T I S E Y L M D T L P G W H V E D F L D - S S L P T Y G F S K S G D D D G V L P
pt038624_POPTR_    - - - G G D N L V T N E G F G S T T S S T I S E Y L M E T L P G W H V E D F L D - S S T T P F G F C K I - - D D G L L P
pt002588_POPTR_    - - - D G D N L V T S E G F G S T T S S T I S E Y L M E T L P G W H V E E F L D S S S T T P F G F S K I - - D D G L L P
gm040650_Glyma1    - - - N N N N K V A V E G T G S T S A S S I S E Y L I E T L P G W Q V E D F L D - S Y F V P F G F C K - - - N D E V L P
 
AT1G75540.1     Y M E P E D D N N T K R N N N N N N N N N N N T V S L P S K N L G I W V P Q I P Q T L P S S Y P N Q Y F S Q D N N I Q F
pt038624_POPTR_    F M D A H D - - - - - - - - - - - - - L E S N M S S F S S E S L G L W V P Q A P S T P Y - T S Q Q Y Y Y - - - - - - - -
pt002588_POPTR_    Y M D T H D - - - - - - - - - - - - - L E R N M S S F S S E S L G L W V P Q A P T P P L C T S Q Q Y Y Y - - - - - - - -
gm040650_Glyma1    R L D A - D - - - - - - - - - - - - - V E G H M G S F S T E N M G I W V P Q A P P P L V C S S Q M - - - - - - - - - - -
 
AT1G75540.1     G M Y N K E T S P E V V S F A - - - - - - P I Q N M K Q Q G Q N N K R W Y D D G G F T V P Q I T P P P L S S N K K F R S
pt038624_POPTR_    - - - - - - - - P Q L V G Q S G F K E I K E T T N M K A N - - - - R R L A D D - V F T V P Q I S L P A N I S S K R S R P
pt002588_POPTR_    - - - - - - - - P Q L V G Q S G F K E T K E S T N M K A N - - - - R R L T D D - A F T V P Q I S P P S N I G S K R S R P
gm040650_Glyma1    - - - - - - - - D R V I V Q S - - - - - - - E T N I K G S S - - I S R L K D D - T F T V P Q I S P P S N - - S K R A R F
 
AT1G75540.1     F W
pt038624_POPTR_    L W
pt002588_POPTR_    L W
gm040650_Glyma1    L W
 
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