fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G75540.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm048125 not found in 278aa AT1G75540.1 1st_1st 0.416517055 Ia
Pt002589 not found in 283aa AT1G75540.1 1st_1st 0.441651705 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G75540.1     MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC
gm048125_Glyma1 MKIQCDVCNKHEASVFCTADEAALCDGCDHRVHHANKLASKHQRFSLLRPSPKQ--HPLC
pt002589_POPTR_ MKIQCDVCSKEEASVFCTADEAALCDTCDHRVHHANKLASKHQRFSLLHPSSKN--FPIC
                ***:****.*.***********:**. ***:*********** ***** **..:   *:*

AT1G75540.1     DICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVYKPTSKS
gm048125_Glyma1 DICQERRAFTFCQQDRAILCKECDVSIHSANEHTLKHDRFLLTGVKLSA-SAMLR---SS
pt002589_POPTR_ DICQDKRAFLFCQQDRAILCRDCDGPIHTANEHTQKHNRFLLTGVKLSATSAVYM---SS
                ****:::*: **********::** .**:***** **:*********** *::     .*

AT1G75540.1     SSSSSSNQDFSVPGSSISNPPPLK---KPLSAPPQSNKIQPFSKINGGDASVNQWGST--
gm048125_Glyma1 ETTSDSN----------SNPSLLNFSHQTTLLPPSSTTTTTTSNNNNNKVAVEGTGSTSA
pt002589_POPTR_ SSSVTMN----------SNPP---------AVPSTLSANTVINKDGDNLVTSEGFGSTTS
                .::   *          ***.           *.  .     .: ... .: :  ***  

AT1G75540.1     STISEYLMDTLPGWHVEDFLDSSL-PTYGFSKSGDDDGVLPYMEPEDDNNTKRNNNNNNN
gm048125_Glyma1 SSISEYLIETLPGWQVEDFLDSYS-VPFGFCK---DDEVLPRFDG-E-------------
pt002589_POPTR_ STISEYLMETLPGWHVEEFLDSSSTTPFGFSKI--DDGLLPYMDTHD-------------
                *:*****::*****:**:****    .:**.*   ** :** ::  :             

AT1G75540.1     NNNNTVSLPSKNLGIWVPQIPQTLPSSYPNQYFSQDNNIQFGMYNKETSPEVVSFAPIQN
gm048125_Glyma1 MEGHLSSFSTENMGIWVPQAPPTLMCS--SQM---DRVIVHGETNIKGSSRS--------
pt002589_POPTR_ LERNMSSFSSESLGLWVPQAPTPPLCT--SQQYYYPQLV--GQSGFKETKEST------N
                 : :  *:.::.:*:**** * .  .:  .*     . :  *  . : : .         

AT1G75540.1     MKQQGQNNKRWYDDGGFTVPQITPPPLSSNKKFRSFW
gm048125_Glyma1 ---------RLKDD-NFTVPQISPPSN--SKRARFLW
pt002589_POPTR_ MKA----NRRLTDD-AFTVPQISPPSNIGSKRSRPLW
                         *  **  ******:**.   .*: * :*
BoxShade v3.31 C (beta, 970507) Output
AT1G75540.1     M K I R C D V C D K E E A S V F C T A D E A S L C G G C D H Q V H H A N K L A S K H L R F S L L Y P S S S N T S S P L C
gm048125_Glyma1    M K I Q C D V C N K H E A S V F C T A D E A A L C D G C D H R V H H A N K L A S K H Q R F S L L R P S P K Q - - H P L C
pt002589_POPTR_    M K I Q C D V C S K E E A S V F C T A D E A A L C D T C D H R V H H A N K L A S K H Q R F S L L H P S S K N - - F P I C
 
AT1G75540.1     D I C Q D K K A L L F C Q Q D R A I L C K D C D S S I H A A N E H T K K H D R F L L T G V K L S A T S S V Y K P T S K S
gm048125_Glyma1    D I C Q E R R A F T F C Q Q D R A I L C K E C D V S I H S A N E H T L K H D R F L L T G V K L S A - S A M L R - - - S S
pt002589_POPTR_    D I C Q D K R A F L F C Q Q D R A I L C R D C D G P I H T A N E H T Q K H N R F L L T G V K L S A T S A V Y M - - - S S
 
AT1G75540.1     S S S S S S N Q D F S V P G S S I S N P P P L K - - - K P L S A P P Q S N K I Q P F S K I N G G D A S V N Q W G S T - -
gm048125_Glyma1    E T T S D S N - - - - - - - - - - S N P S L L N F S H Q T T L L P P S S T T T T T T S N N N N N K V A V E G T G S T S A
pt002589_POPTR_    S S S V T M N - - - - - - - - - - S N P P - - - - - - - - - A V P S T L S A N T V I N K D G D N L V T S E G F G S T T S
 
AT1G75540.1     S T I S E Y L M D T L P G W H V E D F L D S S L - P T Y G F S K S G D D D G V L P Y M E P E D D N N T K R N N N N N N N
gm048125_Glyma1    S S I S E Y L I E T L P G W Q V E D F L D S Y S - V P F G F C K - - - D D E V L P R F D G - E - - - - - - - - - - - - -
pt002589_POPTR_    S T I S E Y L M E T L P G W H V E E F L D S S S T T P F G F S K I - - D D G L L P Y M D T H D - - - - - - - - - - - - -
 
AT1G75540.1     N N N N T V S L P S K N L G I W V P Q I P Q T L P S S Y P N Q Y F S Q D N N I Q F G M Y N K E T S P E V V S F A P I Q N
gm048125_Glyma1    M E G H L S S F S T E N M G I W V P Q A P P T L M C S - - S Q M - - - D R V I V H G E T N I K G S S R S - - - - - - - -
pt002589_POPTR_    L E R N M S S F S S E S L G L W V P Q A P T P P L C T - - S Q Q Y Y Y P Q L V - - G Q S G F K E T K E S T - - - - - - N
 
AT1G75540.1     M K Q Q G Q N N K R W Y D D G G F T V P Q I T P P P L S S N K K F R S F W
gm048125_Glyma1    - - - - - - - - - R L K D D - N F T V P Q I S P P S N - - S K R A R F L W
pt002589_POPTR_    M K A - - - - N R R L T D D - A F T V P Q I S P P S N I G S K R S R P L W
 
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