fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G75540.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt002589 not found in 283aa AT1G75540.1 1st_1st 0.441651705 Ia
Pt002588 not found in 311aa AT1G75540.1 not_1st 0.438061041 II
Pt038624 not found in 310aa AT1G75540.1 not_1st 0.432675044 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G75540.1     MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC
pt038624_POPTR_ MKIQCDVCNKEEASVFCTADEAALCDTCDHRVHHANKLASKHQRFSLLHPSSKNF--PIC
pt002588_POPTR_ MKIQCDVCSKEEASVFCTADEAALCDTCDHRVHHANKLASKHQRFSLLHPSSKNF--PIC
pt002589_POPTR_ MKIQCDVCSKEEASVFCTADEAALCDTCDHRVHHANKLASKHQRFSLLHPSSKNF--PIC
                ***:****.*************:**. ***:*********** *****:***.*   *:*

AT1G75540.1     DICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVYKPTSKS
pt038624_POPTR_ DICQEKRAFLFCQQDRAILCRECDGPIHTANEHTQKHNRFLLTGVKLSATSAVY---ISS
pt002588_POPTR_ DICQDKRAFLFCQQDRAILCRDCDGPIHTANEHTQKHNRFLLTGVKLSATSAVY---MSS
pt002589_POPTR_ DICQDKRAFLFCQQDRAILCRDCDGPIHTANEHTQKHNRFLLTGVKLSATSAVY---MSS
                ****:*:*:***********::**..**:*****:**:*************:**    .*

AT1G75540.1     SSSSSSNQDFSVPGSSI--------------------SNPPPLKKPLSAPPQSNKIQPFS
pt038624_POPTR_ SSVTNSGGDL-VPDSKSQQQQQQQQSIKKPVFDAPVNSNPPTVPSTLSTNTEVNK-----
pt002588_POPTR_ SSSVTSSGDL-VPDSKSQKQQQQQL-IKKPVSVAPVNSNPPAVPSTLSANTVINK-----
pt002589_POPTR_ SSSVT------------------------------MNSNPPAVPSTLSANTVINK-----
                **  .                                ****.: ..**: .  **     

AT1G75540.1     KINGGDASVNQ--WGST--STISEYLMDTLPGWHVEDFLD-SSLPTYGFSKSGDDDGVLP
pt038624_POPTR_ ---GGDNLVTNEGFGSTTSSTISEYLMETLPGWHVEDFLD-SSTTPFGFCKI--DDGLLP
pt002588_POPTR_ ---DGDNLVTSEGFGSTTSSTISEYLMETLPGWHVEEFLDSSSTTPFGFSKI--DDGLLP
pt002589_POPTR_ ---DGDNLVTSEGFGSTTSSTISEYLMETLPGWHVEEFLDSSSTTPFGFSKI--DDGLLP
                   .**  *..  :***  ********:********:*** ** ..:**.*   ***:**

AT1G75540.1     YMEPEDDNNTKRNNNNNNNNNNNTVSLPSKNLGIWVPQIPQTLPSSYPNQYFSQDNNIQF
pt038624_POPTR_ FMDAHD-------------LESNMSSFSSESLGLWVPQAPST-PY-TSQQYYYPQLVGQS
pt002588_POPTR_ YMDTHD-------------LERNMSSFSSESLGLWVPQAPTP-PLCTSQQYYYPQLVGQS
pt002589_POPTR_ YMDTHD-------------LERNMSSFSSESLGLWVPQAPTP-PLCTSQQYYYPQLVGQS
                :*:..*              : *  *:.*:.**:**** * . *   .:**:  :   * 

AT1G75540.1     GMYN-KETSPEVVSFAPIQNMKQQGQNNKRWYDDGGFTVPQITPPPLSSNKKFRSFW
pt038624_POPTR_ GFKEIKETT----------NMKA----NRRLADD-VFTVPQISLPANISSKRSRPLW
pt002588_POPTR_ GFKETKEST----------NMKA----NRRLTDD-AFTVPQISPPSNIGSKRSRPLW
pt002589_POPTR_ GFKETKEST----------NMKA----NRRLTDD-AFTVPQISPPSNIGSKRSRPLW
                *: : **::          ***     *:*  **  ******: *.  ..*: *.:*
BoxShade v3.31 C (beta, 970507) Output
AT1G75540.1     M K I R C D V C D K E E A S V F C T A D E A S L C G G C D H Q V H H A N K L A S K H L R F S L L Y P S S S N T S S P L C
pt038624_POPTR_    M K I Q C D V C N K E E A S V F C T A D E A A L C D T C D H R V H H A N K L A S K H Q R F S L L H P S S K N F - - P I C
pt002588_POPTR_    M K I Q C D V C S K E E A S V F C T A D E A A L C D T C D H R V H H A N K L A S K H Q R F S L L H P S S K N F - - P I C
pt002589_POPTR_    M K I Q C D V C S K E E A S V F C T A D E A A L C D T C D H R V H H A N K L A S K H Q R F S L L H P S S K N F - - P I C
 
AT1G75540.1     D I C Q D K K A L L F C Q Q D R A I L C K D C D S S I H A A N E H T K K H D R F L L T G V K L S A T S S V Y K P T S K S
pt038624_POPTR_    D I C Q E K R A F L F C Q Q D R A I L C R E C D G P I H T A N E H T Q K H N R F L L T G V K L S A T S A V Y - - - I S S
pt002588_POPTR_    D I C Q D K R A F L F C Q Q D R A I L C R D C D G P I H T A N E H T Q K H N R F L L T G V K L S A T S A V Y - - - M S S
pt002589_POPTR_    D I C Q D K R A F L F C Q Q D R A I L C R D C D G P I H T A N E H T Q K H N R F L L T G V K L S A T S A V Y - - - M S S
 
AT1G75540.1     S S S S S S N Q D F S V P G S S I - - - - - - - - - - - - - - - - - - - - S N P P P L K K P L S A P P Q S N K I Q P F S
pt038624_POPTR_    S S V T N S G G D L - V P D S K S Q Q Q Q Q Q Q Q S I K K P V F D A P V N S N P P T V P S T L S T N T E V N K - - - - -
pt002588_POPTR_    S S S V T S S G D L - V P D S K S Q K Q Q Q Q Q L - I K K P V S V A P V N S N P P A V P S T L S A N T V I N K - - - - -
pt002589_POPTR_    S S S V T - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M N S N P P A V P S T L S A N T V I N K - - - - -
 
AT1G75540.1     K I N G G D A S V N Q - - W G S T - - S T I S E Y L M D T L P G W H V E D F L D - S S L P T Y G F S K S G D D D G V L P
pt038624_POPTR_    - - - G G D N L V T N E G F G S T T S S T I S E Y L M E T L P G W H V E D F L D - S S T T P F G F C K I - - D D G L L P
pt002588_POPTR_    - - - D G D N L V T S E G F G S T T S S T I S E Y L M E T L P G W H V E E F L D S S S T T P F G F S K I - - D D G L L P
pt002589_POPTR_    - - - D G D N L V T S E G F G S T T S S T I S E Y L M E T L P G W H V E E F L D S S S T T P F G F S K I - - D D G L L P
 
AT1G75540.1     Y M E P E D D N N T K R N N N N N N N N N N N T V S L P S K N L G I W V P Q I P Q T L P S S Y P N Q Y F S Q D N N I Q F
pt038624_POPTR_    F M D A H D - - - - - - - - - - - - - L E S N M S S F S S E S L G L W V P Q A P S T - P Y - T S Q Q Y Y Y P Q L V G Q S
pt002588_POPTR_    Y M D T H D - - - - - - - - - - - - - L E R N M S S F S S E S L G L W V P Q A P T P - P L C T S Q Q Y Y Y P Q L V G Q S
pt002589_POPTR_    Y M D T H D - - - - - - - - - - - - - L E R N M S S F S S E S L G L W V P Q A P T P - P L C T S Q Q Y Y Y P Q L V G Q S
 
AT1G75540.1     G M Y N - K E T S P E V V S F A P I Q N M K Q Q G Q N N K R W Y D D G G F T V P Q I T P P P L S S N K K F R S F W
pt038624_POPTR_    G F K E I K E T T - - - - - - - - - - N M K A - - - - N R R L A D D - V F T V P Q I S L P A N I S S K R S R P L W
pt002588_POPTR_    G F K E T K E S T - - - - - - - - - - N M K A - - - - N R R L T D D - A F T V P Q I S P P S N I G S K R S R P L W
pt002589_POPTR_    G F K E T K E S T - - - - - - - - - - N M K A - - - - N R R L T D D - A F T V P Q I S P P S N I G S K R S R P L W
 
1