fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G75540.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm040650 not found in 276aa AT1G75540.1 not_1st 0.400359066 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G75540.1     MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC
gm040650_Glyma1 MKIQCDVCNKHEASVFCTADEAALCDGCDHRVHHANKLASKHQRFSLLRP--SHKQHPLC
                ***:****:*.***********:**.****:*********** ***** *  *:.. ***

AT1G75540.1     DICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVYKPTSKS
gm040650_Glyma1 DICQERRAFTFCQQDRAILCKECDVSIHSANEHTLKHDRFLLTGVKLAASAMLRSSQTTS
                ****:::*: ***********:** ***:***** ************:*:: : .. :.*

AT1G75540.1     SSSSS------SNQDFSVPGSSISNPPPLKKPLSAPPQSNKIQPFSKINGGDASVNQWGS
gm040650_Glyma1 DSNSTPSLLNVSHQTTPLPSSTTTT--------TTNNNNNKV-----------AVEGTGS
                .*.*:      *:*  .:*.*: :.        ::  :.**:           :*:  **

AT1G75540.1     T--STISEYLMDTLPGWHVEDFLDSSLPTYGFSKSGDDDGVLPYMEPEDDNNTKRNNNNN
gm040650_Glyma1 TSASSISEYLIETLPGWQVEDFLDSYFVPFGFCK---NDEVLPRLDADVEGHMG------
                *  *:*****::*****:******* : .:**.*   :* *** ::.: :.:        

AT1G75540.1     NNNNNNTVSLPSKNLGIWVPQIPQTLPSSYPNQYFSQDNNIQFGMYNKETSPEVVSFAPI
gm040650_Glyma1 --------SFSTENMGIWVPQAPPPLVCS------SQMDRV---IVQSET----------
                        *:.::*:****** * .* .*      ** :.:   : :.**          

AT1G75540.1     QNMKQQGQNNKRWYDDGGFTVPQITPPPLSSNKKFRSFW
gm040650_Glyma1 -NIK--GSSISRLKDD-TFTVPQISPP--SNSKRARFLW
                 *:*  *.. .*  **  ******:**  *..*: * :*
BoxShade v3.31 C (beta, 970507) Output
AT1G75540.1     M K I R C D V C D K E E A S V F C T A D E A S L C G G C D H Q V H H A N K L A S K H L R F S L L Y P S S S N T S S P L C
gm040650_Glyma1    M K I Q C D V C N K H E A S V F C T A D E A A L C D G C D H R V H H A N K L A S K H Q R F S L L R P - - S H K Q H P L C
 
AT1G75540.1     D I C Q D K K A L L F C Q Q D R A I L C K D C D S S I H A A N E H T K K H D R F L L T G V K L S A T S S V Y K P T S K S
gm040650_Glyma1    D I C Q E R R A F T F C Q Q D R A I L C K E C D V S I H S A N E H T L K H D R F L L T G V K L A A S A M L R S S Q T T S
 
AT1G75540.1     S S S S S - - - - - - S N Q D F S V P G S S I S N P P P L K K P L S A P P Q S N K I Q P F S K I N G G D A S V N Q W G S
gm040650_Glyma1    D S N S T P S L L N V S H Q T T P L P S S T T T T - - - - - - - - T T N N N N N K V - - - - - - - - - - - A V E G T G S
 
AT1G75540.1     T - - S T I S E Y L M D T L P G W H V E D F L D S S L P T Y G F S K S G D D D G V L P Y M E P E D D N N T K R N N N N N
gm040650_Glyma1    T S A S S I S E Y L I E T L P G W Q V E D F L D S Y F V P F G F C K - - - N D E V L P R L D A D V E G H M G - - - - - -
 
AT1G75540.1     N N N N N N T V S L P S K N L G I W V P Q I P Q T L P S S Y P N Q Y F S Q D N N I Q F G M Y N K E T S P E V V S F A P I
gm040650_Glyma1    - - - - - - - - S F S T E N M G I W V P Q A P P P L V C S - - - - - - S Q M D R V - - - I V Q S E T - - - - - - - - - -
 
AT1G75540.1     Q N M K Q Q G Q N N K R W Y D D G G F T V P Q I T P P P L S S N K K F R S F W
gm040650_Glyma1    - N I K - - G S S I S R L K D D - T F T V P Q I S P P - - S N S K R A R F L W
 
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