fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G75540.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm048125 not found in 278aa AT1G75540.1 1st_1st 0.416517055 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G75540.1     MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC
gm048125_Glyma1 MKIQCDVCNKHEASVFCTADEAALCDGCDHRVHHANKLASKHQRFSLLRPSPKQ--HPLC
                ***:****:*.***********:**.****:*********** ***** **..:   ***

AT1G75540.1     DICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVYKPTSKS
gm048125_Glyma1 DICQERRAFTFCQQDRAILCKECDVSIHSANEHTLKHDRFLLTGVKLSASAML----RSS
                ****:::*: ***********:** ***:***** **************:: :     .*

AT1G75540.1     SSSSSSNQDFSVPGSSISNPPPLK---KPLSAPPQSNKIQPFSKINGGDASVNQWGST--
gm048125_Glyma1 ETTSDSN----------SNPSLLNFSHQTTLLPPSSTTTTTTSNNNNNKVAVEGTGSTSA
                .::*.**          ***. *:   :.   **.*..  . *: *....:*:  ***  

AT1G75540.1     STISEYLMDTLPGWHVEDFLDSSLPTYGFSKSGDDDGVLPYMEPEDDNNTKRNNNNNNNN
gm048125_Glyma1 SSISEYLIETLPGWQVEDFLDSYSVPFGFCK---DDEVLPRFDGEMEGHLS---------
                *:*****::*****:*******   .:**.*   ** *** :: * :.: .         

AT1G75540.1     NNNTVSLPSKNLGIWVPQIPQTLPSSYPNQYFSQDNNIQFGMYNKETSPEVVSFAPIQNM
gm048125_Glyma1 -----SFSTENMGIWVPQAPPTLMCS------SQMDRV---IVHGET-----------NI
                     *:.::*:****** * ** .*      ** :.:   : : **           *:

AT1G75540.1     KQQGQNNKRWYDDGGFTVPQITPPPLSSNKKFRSFW
gm048125_Glyma1 K--GSSRSRLKDD-NFTVPQISPP--SNSKRARFLW
                *  *....*  ** .******:**  *..*: * :*
BoxShade v3.31 C (beta, 970507) Output
AT1G75540.1     M K I R C D V C D K E E A S V F C T A D E A S L C G G C D H Q V H H A N K L A S K H L R F S L L Y P S S S N T S S P L C
gm048125_Glyma1    M K I Q C D V C N K H E A S V F C T A D E A A L C D G C D H R V H H A N K L A S K H Q R F S L L R P S P K Q - - H P L C
 
AT1G75540.1     D I C Q D K K A L L F C Q Q D R A I L C K D C D S S I H A A N E H T K K H D R F L L T G V K L S A T S S V Y K P T S K S
gm048125_Glyma1    D I C Q E R R A F T F C Q Q D R A I L C K E C D V S I H S A N E H T L K H D R F L L T G V K L S A S A M L - - - - R S S
 
AT1G75540.1     S S S S S S N Q D F S V P G S S I S N P P P L K - - - K P L S A P P Q S N K I Q P F S K I N G G D A S V N Q W G S T - -
gm048125_Glyma1    E T T S D S N - - - - - - - - - - S N P S L L N F S H Q T T L L P P S S T T T T T T S N N N N N K V A V E G T G S T S A
 
AT1G75540.1     S T I S E Y L M D T L P G W H V E D F L D S S L P T Y G F S K S G D D D G V L P Y M E P E D D N N T K R N N N N N N N N
gm048125_Glyma1    S S I S E Y L I E T L P G W Q V E D F L D S Y S V P F G F C K - - - D D E V L P R F D G E M E G H L S - - - - - - - - -
 
AT1G75540.1     N N N T V S L P S K N L G I W V P Q I P Q T L P S S Y P N Q Y F S Q D N N I Q F G M Y N K E T S P E V V S F A P I Q N M
gm048125_Glyma1    - - - - - S F S T E N M G I W V P Q A P P T L M C S - - - - - - S Q M D R V - - - I V H G E T - - - - - - - - - - - N I
 
AT1G75540.1     K Q Q G Q N N K R W Y D D G G F T V P Q I T P P P L S S N K K F R S F W
gm048125_Glyma1    K - - G S S R S R L K D D - N F T V P Q I S P P - - S N S K R A R F L W
 
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