fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G76110.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt002609 not found in 329aa AT1G76110.1 1st_1st 0.585760517 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G76110.1     MSSDNESTPSQATVEMMATSPAKI------KEYPEPLALHEVVVKDSSVFWDTLRRFHSI
pt002609_POPTR_ ---------------MSPGSKRKLKAGMENKHYPAPLASHEDVVNDPSVFWDTLRRFHFV
                               * . *  *:      *.** *** ** **:*.*********** :

AT1G76110.1     MSTKFMIPVIGGKELDLHVLYVEVTRRGGYEKVVVEKKWREVGGVFRFSATTTSASFVLR
pt002609_POPTR_ MGTKFMIPVIGGKELDLQVLYVETTNRGGYDKVVAEKKWREVGSVFCFSATTTSASFVLK
                *.***************:*****.*.****:***.********.** ************:

AT1G76110.1     KHYLNLLFHYEQVHLFTARGPLLHPIATFH-ANPSTSKEMALVEYTPPSIRYHNTHPPSQ
pt002609_POPTR_ KHYFSLLYHYEQVHFFKIQGPVSTPAVAFPLGSPSSKTELAIVEYSPEPIR-DCPDPSTE
                ***:.**:******:*. :**:  * .:*  ..**:..*:*:***:* .** . ..*.::

AT1G76110.1     GSSSFTAIGTIEGKFDCGYLVKVKLGSEILNGVLYHSAQPGPSSS-PTAVLNNAVVPYVE
pt002609_POPTR_ SSSSFSASGTIEGKFDCGYLVSVQLGSEVLHGVLYHPDQQDLSNSIPQ--YDGAIVPY--
                .****:* *************.*:****:*:*****. * . *.* *    :.*:***  

AT1G76110.1     TGRRRRRLGKRRRSRRREDPNYPKPNRSGYNFFFAEKHCKLKSLYPNKEREFTKLIGESW
pt002609_POPTR_ TPNRRRR---RRRSRRSGDPSYPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGQSW
                * .****   ******  **.***************** ********:******:**:**

AT1G76110.1     SNLSTEERMVYQDIGLKDKERYQRELNEYRETLRLRDG----------DMTNGKAF
pt002609_POPTR_ SSLSAEERMVYQNIGLKDKERYKRELKEYKEKLQLRQAMEVELNIKAQDVQD----
                *.**:*******:*********:***:**:*.*:**:.          *: :
BoxShade v3.31 C (beta, 970507) Output
AT1G76110.1     M S S D N E S T P S Q A T V E M M A T S P A K I - - - - - - K E Y P E P L A L H E V V V K D S S V F W D T L R R F H S I
pt002609_POPTR_    - - - - - - - - - - - - - - - M S P G S K R K L K A G M E N K H Y P A P L A S H E D V V N D P S V F W D T L R R F H F V
 
AT1G76110.1     M S T K F M I P V I G G K E L D L H V L Y V E V T R R G G Y E K V V V E K K W R E V G G V F R F S A T T T S A S F V L R
pt002609_POPTR_    M G T K F M I P V I G G K E L D L Q V L Y V E T T N R G G Y D K V V A E K K W R E V G S V F C F S A T T T S A S F V L K
 
AT1G76110.1     K H Y L N L L F H Y E Q V H L F T A R G P L L H P I A T F H - A N P S T S K E M A L V E Y T P P S I R Y H N T H P P S Q
pt002609_POPTR_    K H Y F S L L Y H Y E Q V H F F K I Q G P V S T P A V A F P L G S P S S K T E L A I V E Y S P E P I R - D C P D P S T E
 
AT1G76110.1     G S S S F T A I G T I E G K F D C G Y L V K V K L G S E I L N G V L Y H S A Q P G P S S S - P T A V L N N A V V P Y V E
pt002609_POPTR_    S S S S F S A S G T I E G K F D C G Y L V S V Q L G S E V L H G V L Y H P D Q Q D L S N S I P Q - - Y D G A I V P Y - -
 
AT1G76110.1     T G R R R R R L G K R R R S R R R E D P N Y P K P N R S G Y N F F F A E K H C K L K S L Y P N K E R E F T K L I G E S W
pt002609_POPTR_    T P N R R R R - - - R R R S R R S G D P S Y P K P N R S G Y N F F F A E K H Y K L K S L Y P N R E R E F T K M I G Q S W
 
AT1G76110.1     S N L S T E E R M V Y Q D I G L K D K E R Y Q R E L N E Y R E T L R L R D G - - - - - - - - - - D M T N G K A F
pt002609_POPTR_    S S L S A E E R M V Y Q N I G L K D K E R Y K R E L K E Y K E K L Q L R Q A M E V E L N I K A Q D V Q D - - - -
 
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