fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G76500.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt000774 not found in 301aa AT1G20900.1 1st_not 0.563218390 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G76500.1     MDGGYDQSGGASRYFH-----NLFRPELHHQLQPQPQLHPLPQPQ-----PQPQPQQQNS
pt000774_POPTR_ -MAGFE--GNNSRYVHGQNHNNLLRPELH--LIQRPSSIPSSDSRDNNNTPSP-PDHAN-
                  .*::  *. ***.*     **:*****  *  :*.  * .:.:     *.* *:: * 

AT1G76500.1     DDESDSNKDPGSDPVTSGSTG----KRPRGRPPGSKNKPKPPVIVTRDSPNVLRSHVLEV
pt000774_POPTR_ ---QTAHHHPDSSATTSSGGGTNPNRRPRGRPAGSKNKPKPPIIVTRDSPNALRSHVIEI
                   . :::.*.*...**.. *    :******.*********:********.*****:*:

AT1G76500.1     SSGADIVESVTTYARRRGRGVSILSGNGTVANVSLRQPATTAAHGANGGTGGVVALHGRF
pt000774_POPTR_ SNGADIVESVSTYARKRGRGVCVLSGSGTVANVTLRQPASPA--------GSVLTLHGRF
                *.********:****:*****.:***.******:*****:.*        *.*::*****

AT1G76500.1     EILSLTGTVLPPPAPPGSGGLSIFLSGVQGQVIGGNVVAPLVASGPVILMAASFSNATFE
pt000774_POPTR_ EILSLSGTVLPPPAPPGAGGLSIFLSGGQGQVVGGNVVGPLMAAGPVVLMAASFANAVFE
                *****:***********:********* ****:*****.**:*:***:******:**.**

AT1G76500.1     RLPLEDE---------------GGEGGEGGEVGEGGGGEGGPPPATSSSPPSGAGQGQLR
pt000774_POPTR_ RLPLDDQEEAGAVQVQPTASQSSGVTGSGGQMGDGGGGSG----------TGGAGSGFF-
                ****:*:               .*  *.**::*:****.*          ..***.* : 

AT1G76500.1     GNMSGYDQ-----FAGDPHLLG-WGAAAAAAPPRPAF
pt000774_POPTR_ -NMAGGAHHGNYPFSGD--LFGPWGGSAA----RPPF
                 **:*  :     *:**  *:* **.:**    **.*
BoxShade v3.31 C (beta, 970507) Output
AT1G76500.1     M D G G Y D Q S G G A S R Y F H - - - - - N L F R P E L H H Q L Q P Q P Q L H P L P Q P Q - - - - - P Q P Q P Q Q Q N S
pt000774_POPTR_    - M A G F E - - G N N S R Y V H G Q N H N N L L R P E L H - - L I Q R P S S I P S S D S R D N N N T P S P - P D H A N -
 
AT1G76500.1     D D E S D S N K D P G S D P V T S G S T G - - - - K R P R G R P P G S K N K P K P P V I V T R D S P N V L R S H V L E V
pt000774_POPTR_    - - - Q T A H H H P D S S A T T S S G G G T N P N R R P R G R P A G S K N K P K P P I I V T R D S P N A L R S H V I E I
 
AT1G76500.1     S S G A D I V E S V T T Y A R R R G R G V S I L S G N G T V A N V S L R Q P A T T A A H G A N G G T G G V V A L H G R F
pt000774_POPTR_    S N G A D I V E S V S T Y A R K R G R G V C V L S G S G T V A N V T L R Q P A S P A - - - - - - - - G S V L T L H G R F
 
AT1G76500.1     E I L S L T G T V L P P P A P P G S G G L S I F L S G V Q G Q V I G G N V V A P L V A S G P V I L M A A S F S N A T F E
pt000774_POPTR_    E I L S L S G T V L P P P A P P G A G G L S I F L S G G Q G Q V V G G N V V G P L M A A G P V V L M A A S F A N A V F E
 
AT1G76500.1     R L P L E D E - - - - - - - - - - - - - - - G G E G G E G G E V G E G G G G E G G P P P A T S S S P P S G A G Q G Q L R
pt000774_POPTR_    R L P L D D Q E E A G A V Q V Q P T A S Q S S G V T G S G G Q M G D G G G G S G - - - - - - - - - - T G G A G S G F F -
 
AT1G76500.1     G N M S G Y D Q - - - - - F A G D P H L L G - W G A A A A A A P P R P A F
pt000774_POPTR_    - N M A G G A H H G N Y P F S G D - - L F G P W G G S A A - - - - R P P F
 
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