fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G76500.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm027914 not found in 280aa AT4G14465.1 1st_not 0.514367816 II
Gm013754 not found in 176aa AT1G76500.1 not_1st 0.479885057 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G76500.1     -MDGGYDQSGGASRYFHNLFRPELHHQLQPQPQLHPLPQPQPQPQPQQQNSDDESDSNKD
gm027914_Glyma1 MANRWWTGSVGLENSGHSMKKPDLGFSMN-----------ESTVTGNHIGEEDEDRENSD
gm013754_Glyma0 ------------------------------------------------------------
                                                                            

AT1G76500.1     PGSDPVTSGSTGKRPRGRPPGSKNKPKPPVIVTRDSPNVLRSHVLEVSSGADIVESVTTY
gm027914_Glyma1 EPREGAIDVATTRRPRGRPPGSRNKPKPPIFVTRDSPNALRSHVMEIAVGADIADCVAQF
gm013754_Glyma0 -------------------MGSKNKPKPPVIVTRDSPNVLRSHVLEVSSGADVVESLSNY
                                    **:******::*******.*****:*:: ***:.:.:: :

AT1G76500.1     ARRRGRGVSILSGNGTVANVSLRQPATTAAHGANGGTGGVVALHGRFEILSLTGTVLPPP
gm027914_Glyma1 ARRRQRGVSILSGSGTVVNVNLRQPT---------APGAVMALHGRFDILSLTGSFLPGP
gm013754_Glyma0 ARRRGRGVSVLSGSGTVANVVLRQPA-----------GSVLTLHGRFEIVSMTGTVLPPP
                **** ****:***.***.** ****:           *.*::*****:*:*:**:.** *

AT1G76500.1     APPGSGGLSIFLSGVQGQVIGGNVVAPLVASGPVILMAASFSNATFERLPLEDEGGEGGE
gm027914_Glyma1 SPPGATGLTIYLAGGQGQIVGGGVVGPLVAAGPVLVMAATFSNATYERLPL-----EDDD
gm013754_Glyma0 APPGSDGLSVYLSGAQGQVVGGVVVAPLVASSHVVLVAASFANAMFERLPLPLNQHDDDD
                :***: **:::*:* ***::** **.****:. *:::**:*:** :*****     :..:

AT1G76500.1     GGEV-GEGGGGE-----GGPPPATSSS-------PPS-GAGQGQLRGNMSGYDQFAGDPH
gm027914_Glyma1 QEQHGGGGGGGSPQEKTGGPGEASSSISVYNNNVPPSLGLPNGQ-HLNHEAYSS----P-
gm013754_Glyma0 QGEVFGWGGTG------------TTSS---------------------------------
                  :  * ** *            ::*                                  

AT1G76500.1     LLGWGAAAAAAPPR--PAF
gm027914_Glyma1 ---WGHSPHARPPF-----
gm013754_Glyma0 -------TSTAPPKTHPF-
                       . : **
BoxShade v3.31 C (beta, 970507) Output
AT1G76500.1     - M D G G Y D Q S G G A S R Y F H N L F R P E L H H Q L Q P Q P Q L H P L P Q P Q P Q P Q P Q Q Q N S D D E S D S N K D
gm027914_Glyma1    M A N R W W T G S V G L E N S G H S M K K P D L G F S M N - - - - - - - - - - - E S T V T G N H I G E E D E D R E N S D
gm013754_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT1G76500.1     P G S D P V T S G S T G K R P R G R P P G S K N K P K P P V I V T R D S P N V L R S H V L E V S S G A D I V E S V T T Y
gm027914_Glyma1    E P R E G A I D V A T T R R P R G R P P G S R N K P K P P I F V T R D S P N A L R S H V M E I A V G A D I A D C V A Q F
gm013754_Glyma0    - - - - - - - - - - - - - - - - - - - M G S K N K P K P P V I V T R D S P N V L R S H V L E V S S G A D V V E S L S N Y
 
AT1G76500.1     A R R R G R G V S I L S G N G T V A N V S L R Q P A T T A A H G A N G G T G G V V A L H G R F E I L S L T G T V L P P P
gm027914_Glyma1    A R R R Q R G V S I L S G S G T V V N V N L R Q P T - - - - - - - - - A P G A V M A L H G R F D I L S L T G S F L P G P
gm013754_Glyma0    A R R R G R G V S V L S G S G T V A N V V L R Q P A - - - - - - - - - - - G S V L T L H G R F E I V S M T G T V L P P P
 
AT1G76500.1     A P P G S G G L S I F L S G V Q G Q V I G G N V V A P L V A S G P V I L M A A S F S N A T F E R L P L E D E G G E G G E
gm027914_Glyma1    S P P G A T G L T I Y L A G G Q G Q I V G G G V V G P L V A A G P V L V M A A T F S N A T Y E R L P L - - - - - E D D D
gm013754_Glyma0    A P P G S D G L S V Y L S G A Q G Q V V G G V V V A P L V A S S H V V L V A A S F A N A M F E R L P L P L N Q H D D D D
 
AT1G76500.1     G G E V - G E G G G G E - - - - - G G P P P A T S S S - - - - - - - P P S - G A G Q G Q L R G N M S G Y D Q F A G D P H
gm027914_Glyma1    Q E Q H G G G G G G G S P Q E K T G G P G E A S S S I S V Y N N N V P P S L G L P N G Q - H L N H E A Y S S - - - - P -
gm013754_Glyma0    Q G E V F G W G G T G - - - - - - - - - - - - T T S S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT1G76500.1     L L G W G A A A A A A P P R - - P A F
gm027914_Glyma1    - - - W G H S P H A R P P F - - - - -
gm013754_Glyma0    - - - - - - - T S T A P P K T H P F -
 
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