fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G77200.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt005791 not found in 257aa AT5G11590.1 not_not 0.451523545 III
Pt005792 not found in 188aa AT5G11590.1 not_not 0.418282548 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G77200.1     ---------MTESSIISVKQ------SSPVPEEEDHHHHQQDSHRTNTKK--RVRSD---
pt005792_POPTR_ ------------------------------------------------------------
pt005791_POPTR_ MSDHQQQNLETESS--STKAFSPPSPSSPSSNSNPSKKHQQDQDFSPCKKITRIRDSSKH
                                                                            

AT1G77200.1     PGYRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPE
pt005792_POPTR_ -------MRNWGKWVSEIREPRKKSRIWLGTFPTPEKAARAHDAAALSIKGNSAILNFPE
pt005791_POPTR_ PVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEKAARAHDAAALSIKGNSAILNFPE
                       **.**********************.*** **********:***.**:*****

AT1G77200.1     LATYLPRPASSSPRDVQAAAAVAAAMD-FSPSSSSLVVSDPTTVIAPAETQLSSSSYSTC
pt005792_POPTR_ LANSLPRPASLAPRDVQAAAAKAAQMDNFDQKSET-------------TTTTTASSSSSC
pt005791_POPTR_ LANSLPRPASLAPRDVQAAAAKAAQMDNFDQKSET-------------TTTTTASSSSSC
                **. ****** :********* ** ** *. .*.:              *  ::** *:*

AT1G77200.1     TSSSLSPSS-EEAASTAEELSEIVELPSLETSYDESLSEFVYVDSA----YPPSSPWYI-
pt005792_POPTR_ TSSLTSLVSLMDLSSQDEELSEIVELPSLETSYDELNNDFVYSDSVYGWMYPP--PWMQS
pt005791_POPTR_ TSSLTSLVSLMDLSSQDEELSEIVELPSLETSYDELNNDFVYSDSVYGWMYPP--PWMQS
                ***  *  *  : :*  ******************  .:*** **.    ***  **   

AT1G77200.1     --NNCYS---FYYHSDENGISMAEPFDSSNFGPLFP
pt005792_POPTR_ VENICLSGGGGGYACDD----FTLPNESTVLWNY--
pt005791_POPTR_ VENICLSGGGVGENTTTTAGLISILKQAEAFKNW--
                  * * *              ::   ::  :
BoxShade v3.31 C (beta, 970507) Output
AT1G77200.1     - - - - - - - - - M T E S S I I S V K Q - - - - - - S S P V P E E E D H H H H Q Q D S H R T N T K K - - R V R S D - - -
pt005792_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt005791_POPTR_    M S D H Q Q Q N L E T E S S - - S T K A F S P P S P S S P S S N S N P S K K H Q Q D Q D F S P C K K I T R I R D S S K H
 
AT1G77200.1     P G Y R G V R M R T W G K W V S E I R E P R K K S R I W L G T F S T P E M A A R A H D A A A L T I K G T S A V L N F P E
pt005792_POPTR_    - - - - - - - M R N W G K W V S E I R E P R K K S R I W L G T F P T P E K A A R A H D A A A L S I K G N S A I L N F P E
pt005791_POPTR_    P V Y R G V R M R N W G K W V S E I R E P R K K S R I W L G T F P T P E K A A R A H D A A A L S I K G N S A I L N F P E
 
AT1G77200.1     L A T Y L P R P A S S S P R D V Q A A A A V A A A M D - F S P S S S S L V V S D P T T V I A P A E T Q L S S S S Y S T C
pt005792_POPTR_    L A N S L P R P A S L A P R D V Q A A A A K A A Q M D N F D Q K S E T - - - - - - - - - - - - - T T T T T A S S S S S C
pt005791_POPTR_    L A N S L P R P A S L A P R D V Q A A A A K A A Q M D N F D Q K S E T - - - - - - - - - - - - - T T T T T A S S S S S C
 
AT1G77200.1     T S S S L S P S S - E E A A S T A E E L S E I V E L P S L E T S Y D E S L S E F V Y V D S A - - - - Y P P S S P W Y I -
pt005792_POPTR_    T S S L T S L V S L M D L S S Q D E E L S E I V E L P S L E T S Y D E L N N D F V Y S D S V Y G W M Y P P - - P W M Q S
pt005791_POPTR_    T S S L T S L V S L M D L S S Q D E E L S E I V E L P S L E T S Y D E L N N D F V Y S D S V Y G W M Y P P - - P W M Q S
 
AT1G77200.1     - - N N C Y S - - - F Y Y H S D E N G I S M A E P F D S S N F G P L F P
pt005792_POPTR_    V E N I C L S G G G G G Y A C D D - - - - F T L P N E S T V L W N Y - -
pt005791_POPTR_    V E N I C L S G G G V G E N T T T T A G L I S I L K Q A E A F K N W - -
 
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