fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G77200.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm039871 not found in 244aa AT5G11590.1 1st_not 0.445983379 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G77200.1     ---------MTESSIISVKQSSPVPEEEDHHHHQQDSHRTNTKKRVRSD---PGYRGVRM
gm039871_Glyma1 MRVSTQNNSETESSSTSFLPPSPSPSPS-----SPPSSEFKTEKRNRESNKHPVYRGVRM
                          ****  *.  .** *. .     .  * . :*:** *..   * ******

AT1G77200.1     RTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPELATYLPRP
gm039871_Glyma1 RNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAASLPRP
                *.**********************.**********.***:***.**:*******: ****

AT1G77200.1     ASSSPRDVQAAAAVAAAMDFSPSSSSLVVSD--PTTVIAPAETQLSSSSYSTCTSSSLSP
gm039871_Glyma1 VSLAPRDVQAAAAKAAHMDL-PSTSSSISSSLVPTTQSASS----SSSSLSSLTSADLLP
                .* :********* ** **: **:** : *.  ***  *.:    **** *: **:.* *

AT1G77200.1     SSEEAASTAEELSEIVELPSLETSYDESLSEFVYVDSA----YPPSSPWYINNCYSFYYH
gm039871_Glyma1 TA------SEELSEIIKLPRLETTSYELGNEFVFMDSQDAWMYQPPIPWL----HTTYDG
                ::      :******::** ***:  *  .***::**     * *. **     :: *  

AT1G77200.1     SDENGISMAEPFDSSNFGPLFP--
gm039871_Glyma1 SDADEFVVPESGVVTSFESFLWDY
                ** : : :.*.   :.* .::
BoxShade v3.31 C (beta, 970507) Output
AT1G77200.1     - - - - - - - - - M T E S S I I S V K Q S S P V P E E E D H H H H Q Q D S H R T N T K K R V R S D - - - P G Y R G V R M
gm039871_Glyma1    M R V S T Q N N S E T E S S S T S F L P P S P S P S P S - - - - - S P P S S E F K T E K R N R E S N K H P V Y R G V R M
 
AT1G77200.1     R T W G K W V S E I R E P R K K S R I W L G T F S T P E M A A R A H D A A A L T I K G T S A V L N F P E L A T Y L P R P
gm039871_Glyma1    R N W G K W V S E I R E P R K K S R I W L G T F P T P E M A A R A H D V A A L S I K G N S A I L N F P E L A A S L P R P
 
AT1G77200.1     A S S S P R D V Q A A A A V A A A M D F S P S S S S L V V S D - - P T T V I A P A E T Q L S S S S Y S T C T S S S L S P
gm039871_Glyma1    V S L A P R D V Q A A A A K A A H M D L - P S T S S S I S S S L V P T T Q S A S S - - - - S S S S L S S L T S A D L L P
 
AT1G77200.1     S S E E A A S T A E E L S E I V E L P S L E T S Y D E S L S E F V Y V D S A - - - - Y P P S S P W Y I N N C Y S F Y Y H
gm039871_Glyma1    T A - - - - - - S E E L S E I I K L P R L E T T S Y E L G N E F V F M D S Q D A W M Y Q P P I P W L - - - - H T T Y D G
 
AT1G77200.1     S D E N G I S M A E P F D S S N F G P L F P - -
gm039871_Glyma1    S D A D E F V V P E S G V V T S F E S F L W D Y
 
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