fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G77200.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm001481 not found in 157aa AT5G11590.1 not_not 0.404432132 III
Gm011442 FLDLPDLSLDLSHGAD in 189/230 AT2G44940.1 not_not 0.401662049 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G77200.1     ----------MTESSII------------------SVKQSSPVPEEEDHHHHQQDSHRTN
gm001481_Glyma0 MSRNTNSELRSGESKLV-----PSGGSSTI-----SPRSSSGVAA---------------
gm011442_Glyma0 --------MVMEESNPLDNEVQPTTSSSSFTITTPSTSSSSSIEEATNTTKEKKKKANSN
                            **. :                  *  .** :                 

AT1G77200.1     TKKRVRSDPGYRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAALTIKGT
gm001481_Glyma0 ------GDGGVRG------------------------GASMDAALAA-----AACTSRG-
gm011442_Glyma0 EGKH----PTYRGVRMRQWGKWVSEIREPRKKSRIWLGTFPTPDMAARAHDVAALTIKGS
                           **                        *:   . :**     ** * :* 

AT1G77200.1     SAVLNFPELATYLPRPASSS--------PRDVQAAAAVAAAMDFSPSSSSLVVSDPTTVI
gm001481_Glyma0 -------ELEAGRGREAASSGKLRMADEPFIVSAATSWARA-------------------
gm011442_Glyma0 SAYLNFPELADELPRPASTS--------PKDIQAAAAKAAALDFGHRSHD----------
                       **     * *::*        *  :.**:: * *                   

AT1G77200.1     APAETQLS---SSSYSTCTSSSLSPSSEEAASTAEELSEIVELPSLETSYDESLSEFVYV
gm001481_Glyma0 --AISAVAKVPSQIRFFFRGSRISDTH---------------LPHVRI------------
gm011442_Glyma0 --AESELSRAVSSSILTQASSSSSNSS----SLKGVDDTFLDLPDLSLDLSHGADEFHY-
                  * : ::   *.      .*  * :                ** :              

AT1G77200.1     DSAYPPSSPWYINNCYSFYYHSDENGISMAEPFDSSNFGPLFP
gm001481_Glyma0 ------RTPLYTECLLLLFL---LLLLSLAR-FLERSILGLNN
gm011442_Glyma0 ------SSAWLVAGAEHI-----ELGFRLEDPFLWESY-----
                       :.        :        : :   *   .
BoxShade v3.31 C (beta, 970507) Output
AT1G77200.1     - - - - - - - - - - M T E S S I I - - - - - - - - - - - - - - - - - - S V K Q S S P V P E E E D H H H H Q Q D S H R T N
gm001481_Glyma0    M S R N T N S E L R S G E S K L V - - - - - P S G G S S T I - - - - - S P R S S S G V A A - - - - - - - - - - - - - - -
gm011442_Glyma0    - - - - - - - - M V M E E S N P L D N E V Q P T T S S S S F T I T T P S T S S S S S I E E A T N T T K E K K K K A N S N
 
AT1G77200.1     T K K R V R S D P G Y R G V R M R T W G K W V S E I R E P R K K S R I W L G T F S T P E M A A R A H D A A A L T I K G T
gm001481_Glyma0    - - - - - - G D G G V R G - - - - - - - - - - - - - - - - - - - - - - - - G A S M D A A L A A - - - - - A A C T S R G -
gm011442_Glyma0    E G K H - - - - P T Y R G V R M R Q W G K W V S E I R E P R K K S R I W L G T F P T P D M A A R A H D V A A L T I K G S
 
AT1G77200.1     S A V L N F P E L A T Y L P R P A S S S - - - - - - - - P R D V Q A A A A V A A A M D F S P S S S S L V V S D P T T V I
gm001481_Glyma0    - - - - - - - E L E A G R G R E A A S S G K L R M A D E P F I V S A A T S W A R A - - - - - - - - - - - - - - - - - - -
gm011442_Glyma0    S A Y L N F P E L A D E L P R P A S T S - - - - - - - - P K D I Q A A A A K A A A L D F G H R S H D - - - - - - - - - -
 
AT1G77200.1     A P A E T Q L S - - - S S S Y S T C T S S S L S P S S E E A A S T A E E L S E I V E L P S L E T S Y D E S L S E F V Y V
gm001481_Glyma0    - - A I S A V A K V P S Q I R F F F R G S R I S D T H - - - - - - - - - - - - - - - L P H V R I - - - - - - - - - - - -
gm011442_Glyma0    - - A E S E L S R A V S S S I L T Q A S S S S S N S S - - - - S L K G V D D T F L D L P D L S L D L S H G A D E F H Y -
 
AT1G77200.1     D S A Y P P S S P W Y I N N C Y S F Y Y H S D E N G I S M A E P F D S S N F G P L F P
gm001481_Glyma0    - - - - - - R T P L Y T E C L L L L F L - - - L L L L S L A R - F L E R S I L G L N N
gm011442_Glyma0    - - - - - - S S A W L V A G A E H I - - - - - E L G F R L E D P F L W E S Y - - - - -
 
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