fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G77200.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm039871 not found in 244aa AT5G11590.1 1st_not 0.445983379 II
Gm001481 not found in 157aa AT5G11590.1 not_not 0.404432132 III
Gm011442 FLDLPDLSLDLSHGAD in 189/230 AT2G44940.1 not_not 0.401662049 III
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Get formatted file made by BOXSHADE
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CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G77200.1     -----------MTE--SSIISVKQSSPVPEEEDHHHHQQDSHRTNTKKRVRSD---PGYR
gm001481_Glyma0 ----MSRNTNSELR--SGESKLVPSGGSSTIS----------------------------
gm039871_Glyma1 --MRVSTQNNSETE--SSSTSFLPPSPSPSPSSP-----PSSEFKTEKRNRESNKHPVYR
gm011442_Glyma0 MVMEESNPLDNEVQPTTSSSSFTITTPSTSSSSSIEEATNTTKEKKKKANSNEGKHPTYR
                             .  :.  ..  .   .  .                            

AT1G77200.1     GVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPELATY
gm001481_Glyma0 ----------------PRSSS-----------------GVAA----GDGGVRGGASMDAA
gm039871_Glyma1 GVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAAS
gm011442_Glyma0 GVRMRQWGKWVSEIREPRKKSRIWLGTFPTPDMAARAHDVAALTIKGSSAYLNFPELADE
                                **..*                 ..**    * ..  . ..:   

AT1G77200.1     LPRPASSSPRDVQAAAAVAAAMDF-------SPSSSSLVVSDPTTVIAPAETQLSSSSYS
gm001481_Glyma0 LAAAACTSRGELEAGRGREA------------ASSGKLRMADEPFIVSAATS-WARAAIS
gm039871_Glyma1 LPRPVSLAPRDVQAAAAKAAHMDL--------PSTSSSISSSLVPTTQSASS--SSSSLS
gm011442_Glyma0 LPRPASTSPKDIQAAAAKAAALDFGHRSHDAESELSRAVSSSILTQASSSSS--NSSSLK
                *. ... :  :::*. .  *            .. .    :.      .: :    :: .

AT1G77200.1     TCTSSSL-SPSSEEAASTAEELSEIVELPSLETSYDESLSEFVYVDSA----YPPSSPWY
gm001481_Glyma0 AVAK----VP------------SQI---------------RFFFRGSRISDTHLPH----
gm039871_Glyma1 SLTSADL-LP------TASEELSEIIKLPRLETTSYELGNEFVFMDSQDAWMYQPPIPWL
gm011442_Glyma0 GVDDTFLDLP------DLSLDLSH------------------------------------
                   .     *            *.                                    

AT1G77200.1     IN-----NCYSFYYHSD---------ENGISMAEPFDSSNFGPLFP--------------
gm001481_Glyma0 -----------------------------VRIRTPLYTECLLLLFLLLLLSLARFLERSI
gm039871_Glyma1 HTTYDGSDADEFVVPESGVVTSFE----------SFLWDY--------------------
gm011442_Glyma0 -------GADEFHYSSAWLVAGAEHIELGFRLEDPFLWESY-------------------
                                                  .:  .                     

AT1G77200.1     -----
gm001481_Glyma0 LGLNN
gm039871_Glyma1 -----
gm011442_Glyma0 -----
BoxShade v3.31 C (beta, 970507) Output
AT1G77200.1     - - - - - - - - - - - M T E - - S S I I S V K Q S S P V P E E E D H H H H Q Q D S H R T N T K K R V R S D - - - P G Y R
gm001481_Glyma0    - - - - M S R N T N S E L R - - S G E S K L V P S G G S S T I S - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm039871_Glyma1    - - M R V S T Q N N S E T E - - S S S T S F L P P S P S P S P S S P - - - - - P S S E F K T E K R N R E S N K H P V Y R
gm011442_Glyma0    M V M E E S N P L D N E V Q P T T S S S S F T I T T P S T S S S S S I E E A T N T T K E K K K K A N S N E G K H P T Y R
 
AT1G77200.1     G V R M R T W G K W V S E I R E P R K K S R I W L G T F S T P E M A A R A H D A A A L T I K G T S A V L N F P E L A T Y
gm001481_Glyma0    - - - - - - - - - - - - - - - - P R S S S - - - - - - - - - - - - - - - - - G V A A - - - - G D G G V R G G A S M D A A
gm039871_Glyma1    G V R M R N W G K W V S E I R E P R K K S R I W L G T F P T P E M A A R A H D V A A L S I K G N S A I L N F P E L A A S
gm011442_Glyma0    G V R M R Q W G K W V S E I R E P R K K S R I W L G T F P T P D M A A R A H D V A A L T I K G S S A Y L N F P E L A D E
 
AT1G77200.1     L P R P A S S S P R D V Q A A A A V A A A M D F - - - - - - - S P S S S S L V V S D P T T V I A P A E T Q L S S S S Y S
gm001481_Glyma0    L A A A A C T S R G E L E A G R G R E A - - - - - - - - - - - - A S S G K L R M A D E P F I V S A A T S - W A R A A I S
gm039871_Glyma1    L P R P V S L A P R D V Q A A A A K A A H M D L - - - - - - - - P S T S S S I S S S L V P T T Q S A S S - - S S S S L S
gm011442_Glyma0    L P R P A S T S P K D I Q A A A A K A A A L D F G H R S H D A E S E L S R A V S S S I L T Q A S S S S S - - N S S S L K
 
AT1G77200.1     T C T S S S L - S P S S E E A A S T A E E L S E I V E L P S L E T S Y D E S L S E F V Y V D S A - - - - Y P P S S P W Y
gm001481_Glyma0    A V A K - - - - V P - - - - - - - - - - - - S Q I - - - - - - - - - - - - - - - R F F F R G S R I S D T H L P H - - - -
gm039871_Glyma1    S L T S A D L - L P - - - - - - T A S E E L S E I I K L P R L E T T S Y E L G N E F V F M D S Q D A W M Y Q P P I P W L
gm011442_Glyma0    G V D D T F L D L P - - - - - - D L S L D L S H - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT1G77200.1     I N - - - - - N C Y S F Y Y H S D - - - - - - - - - E N G I S M A E P F D S S N F G P L F P - - - - - - - - - - - - - -
gm001481_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - V R I R T P L Y T E C L L L L F L L L L L S L A R F L E R S I
gm039871_Glyma1    H T T Y D G S D A D E F V V P E S G V V T S F E - - - - - - - - - - S F L W D Y - - - - - - - - - - - - - - - - - - - -
gm011442_Glyma0    - - - - - - - G A D E F H Y S S A W L V A G A E H I E L G F R L E D P F L W E S Y - - - - - - - - - - - - - - - - - - -
 
AT1G77200.1     - - - - -
gm001481_Glyma0    L G L N N
gm039871_Glyma1    - - - - -
gm011442_Glyma0    - - - - -
 
0