fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G77450.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt038350 not found in 291aa AT1G01720.1 1st_not 0.630393996 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G77450.1     MMKSGADLQFPPGFRFHPTDEELVLMYLCRKCASQPIPAPIITELDLYRYDPWDLPDMAL
pt038350_POPTR_ --MTAATLELPPGFRFHPTDEELVLHYLCRKCSSQPIAVPIIAEIDLYKFDPWDLPGIAL
                   :.* *::*************** ******:****..***:*:***::******.:**

AT1G77450.1     YGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGRPKPVGIKKALVFYSGKPP
pt038350_POPTR_ YGEKEWYFFTPRDRKYPNGSRPNRAAGRGYWKATGADKPIGQPKTVGIKKALVFYAGKAP
                *********:***************** *************:**.**********:**.*

AT1G77450.1     NGEKTNWIMHEYRLADVDRSVRKKNSLRLDDWVLCRIYNKKGVIEKRRSDI---------
pt038350_POPTR_ KGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGTVEKQEQHLSVKKANPTE
                :*******************.*********************.:**:...:         

AT1G77450.1     --EDGLKPVTDTCPPE-------------------SVARL---ISGSEQAVSPEFTC---
pt038350_POPTR_ IEEDEKKQVVLLPPPQAPSSATGTVNDYMYFDTSDSVPRMHTDSSCSEHVVSPEFTCEVQ
                  **  * *.   **:                   **.*:    * **:.*******   

AT1G77450.1     SNGRLS-----NALDFPFNYVDAIADNEIVSRLLGGNQMWSTTLDPLVVRQGTF
pt038350_POPTR_ SEPRWKEWGNVNALDNPYNYLDATMDIPFASQLQGDNQM-SPLQDIFMHLQKPF
                *: * .     **** *:**:**  *  :.*:* *.*** *.  * ::  * .*
BoxShade v3.31 C (beta, 970507) Output
AT1G77450.1     M M K S G A D L Q F P P G F R F H P T D E E L V L M Y L C R K C A S Q P I P A P I I T E L D L Y R Y D P W D L P D M A L
pt038350_POPTR_    - - M T A A T L E L P P G F R F H P T D E E L V L H Y L C R K C S S Q P I A V P I I A E I D L Y K F D P W D L P G I A L
 
AT1G77450.1     Y G E K E W Y F F S P R D R K Y P N G S R P N R A A G T G Y W K A T G A D K P I G R P K P V G I K K A L V F Y S G K P P
pt038350_POPTR_    Y G E K E W Y F F T P R D R K Y P N G S R P N R A A G R G Y W K A T G A D K P I G Q P K T V G I K K A L V F Y A G K A P
 
AT1G77450.1     N G E K T N W I M H E Y R L A D V D R S V R K K N S L R L D D W V L C R I Y N K K G V I E K R R S D I - - - - - - - - -
pt038350_POPTR_    K G E K T N W I M H E Y R L A D V D R S A R K K N S L R L D D W V L C R I Y N K K G T V E K Q E Q H L S V K K A N P T E
 
AT1G77450.1     - - E D G L K P V T D T C P P E - - - - - - - - - - - - - - - - - - - S V A R L - - - I S G S E Q A V S P E F T C - - -
pt038350_POPTR_    I E E D E K K Q V V L L P P P Q A P S S A T G T V N D Y M Y F D T S D S V P R M H T D S S C S E H V V S P E F T C E V Q
 
AT1G77450.1     S N G R L S - - - - - N A L D F P F N Y V D A I A D N E I V S R L L G G N Q M W S T T L D P L V V R Q G T F
pt038350_POPTR_    S E P R W K E W G N V N A L D N P Y N Y L D A T M D I P F A S Q L Q G D N Q M - S P L Q D I F M H L Q K P F
 
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