fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G77450.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm014854 not found in 299aa AT1G01720.1 1st_not 0.637898686 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G77450.1     MMKSGADLQFPPGFRFHPTDEELVLMYLCRKCASQPIPAPIITELDLYRYDPWDLPDMAL
gm014854_Glyma0 ---MASELELPPGFRFHPTDEELVLHYLCRKCASQPIAVPIIAEIDLYKYDPWDLPGLAT
                    .::*::*************** ***********..***:*:***:*******.:* 

AT1G77450.1     YGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGRPKPVGIKKALVFYSGKPP
gm014854_Glyma0 YGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGQPKPVGIKKALVFYAGKAP
                *****************************************:*************:**.*

AT1G77450.1     NGEKTNWIMHEYRLADVDRSVRKKNSLRLDDWVLCRIYNKKGVIEK-------------R
gm014854_Glyma0 KGDKSNWIMHEYRLADVDRSVRKKNTLRLDDWVLCRIYNKKGTIEKLQPSSDVAHSRNIE
                :*:*:********************:****************.***             .

AT1G77450.1     RSDIEDG----LK--------PVTDTCPPESVARL-----------------ISGSEQAV
gm014854_Glyma0 SSEIEDRKPEILKSGGGCLPPPVPVPAPPQATAKTDYMYFDPSDSIPKLHTDSSCSEQVV
                 *:***     **        **. ..**::.*:                   * ***.*

AT1G77450.1     SPEFTCSN------GRLSNALDFPFNYVDAIADNEIVSRLLGGNQMWSTTLDPLVVRQGT
gm014854_Glyma0 SPEFASEVQSEPKWNEWEKSLEFPFNYVDATLNNSFMAQFQGNNQM----LSPL---QDM
                ****:..       .. .::*:********  :*.::::: *.***    *.**   *. 

AT1G77450.1     F--------
gm014854_Glyma0 FMYWPNKSF
                *
BoxShade v3.31 C (beta, 970507) Output
AT1G77450.1     M M K S G A D L Q F P P G F R F H P T D E E L V L M Y L C R K C A S Q P I P A P I I T E L D L Y R Y D P W D L P D M A L
gm014854_Glyma0    - - - M A S E L E L P P G F R F H P T D E E L V L H Y L C R K C A S Q P I A V P I I A E I D L Y K Y D P W D L P G L A T
 
AT1G77450.1     Y G E K E W Y F F S P R D R K Y P N G S R P N R A A G T G Y W K A T G A D K P I G R P K P V G I K K A L V F Y S G K P P
gm014854_Glyma0    Y G E K E W Y F F S P R D R K Y P N G S R P N R A A G T G Y W K A T G A D K P I G Q P K P V G I K K A L V F Y A G K A P
 
AT1G77450.1     N G E K T N W I M H E Y R L A D V D R S V R K K N S L R L D D W V L C R I Y N K K G V I E K - - - - - - - - - - - - - R
gm014854_Glyma0    K G D K S N W I M H E Y R L A D V D R S V R K K N T L R L D D W V L C R I Y N K K G T I E K L Q P S S D V A H S R N I E
 
AT1G77450.1     R S D I E D G - - - - L K - - - - - - - - P V T D T C P P E S V A R L - - - - - - - - - - - - - - - - - I S G S E Q A V
gm014854_Glyma0    S S E I E D R K P E I L K S G G G C L P P P V P V P A P P Q A T A K T D Y M Y F D P S D S I P K L H T D S S C S E Q V V
 
AT1G77450.1     S P E F T C S N - - - - - - G R L S N A L D F P F N Y V D A I A D N E I V S R L L G G N Q M W S T T L D P L V V R Q G T
gm014854_Glyma0    S P E F A S E V Q S E P K W N E W E K S L E F P F N Y V D A T L N N S F M A Q F Q G N N Q M - - - - L S P L - - - Q D M
 
AT1G77450.1     F - - - - - - - -
gm014854_Glyma0    F M Y W P N K S F
 
0