fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G77640.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt038409 not found in 214aa AT1G77640.1 1st_1st 0.377840909 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G77640.1     MVKQELKIQVTTSSSSLSHSSSSSSSSTSALRHQSCKNKIKKYKGVRMRSWGSWVTEIRA
pt038409_POPTR_ MVKNEHKIQ--------SETSTPMPTSSSA-----CKK--KKYKGVRMRSWGSWVSEIRA
                ***:* ***        *.:*:. .:*:**     **:  ***************:****

AT1G77640.1     PNQKTRIWLGSYSTAEAAARAYDAALLCLKGPKANLNFPNITTTSPFLMNIDEKTLLSPK
pt038409_POPTR_ PNQKTRIWLGSYSTPEAAARAYDAALLCLKGSSANLNFP--ITSSHYIPD----AVMSPK
                **************.****************..******   *:* :: :    :::***

AT1G77640.1     SIQKVAAQAANSSSDHFTPPSDENDHDHDDGLDHHPSASSSAASSPPDDDHHNDDDGDLV
pt038409_POPTR_ SIQRVAAAAANSSEDNPTTPQVSS-----LPLPSSSSSSSSILSSPSMVSSPSDQPDDYM
                ***:*** *****.*: *.*. ..       *   .*:***  ***.  .  .*: .* :

AT1G77640.1     SLMESFVDYNEHVSLMDPSLYEFGH-------NEIFFTNGDPFDYSPQLHSSEATMDDFY
pt038409_POPTR_ SLMESFETDNEPIPMLD-SWYNFDGLQSPKYIDQMF--NGVSFN--PPM------IDDFY
                ******   ** :.::* * *:*.        :::*  ** .*:  * :      :****

AT1G77640.1     DDVDIPLWSFS-
pt038409_POPTR_ EG-DIRLWSFAE
                :. ** ****:
BoxShade v3.31 C (beta, 970507) Output
AT1G77640.1     M V K Q E L K I Q V T T S S S S L S H S S S S S S S S T S A L R H Q S C K N K I K K Y K G V R M R S W G S W V T E I R A
pt038409_POPTR_    M V K N E H K I Q - - - - - - - - S E T S T P M P T S S S A - - - - - C K K - - K K Y K G V R M R S W G S W V S E I R A
 
AT1G77640.1     P N Q K T R I W L G S Y S T A E A A A R A Y D A A L L C L K G P K A N L N F P N I T T T S P F L M N I D E K T L L S P K
pt038409_POPTR_    P N Q K T R I W L G S Y S T P E A A A R A Y D A A L L C L K G S S A N L N F P - - I T S S H Y I P D - - - - A V M S P K
 
AT1G77640.1     S I Q K V A A Q A A N S S S D H F T P P S D E N D H D H D D G L D H H P S A S S S A A S S P P D D D H H N D D D G D L V
pt038409_POPTR_    S I Q R V A A A A A N S S E D N P T T P Q V S S - - - - - L P L P S S S S S S S S I L S S P S M V S S P S D Q P D D Y M
 
AT1G77640.1     S L M E S F V D Y N E H V S L M D P S L Y E F G H - - - - - - - N E I F F T N G D P F D Y S P Q L H S S E A T M D D F Y
pt038409_POPTR_    S L M E S F E T D N E P I P M L D - S W Y N F D G L Q S P K Y I D Q M F - - N G V S F N - - P P M - - - - - - I D D F Y
 
AT1G77640.1     D D V D I P L W S F S -
pt038409_POPTR_    E G - D I R L W S F A E
 
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