fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G78080.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm014755 not found in 302aa AT1G78080.1 1st_1st 0.476510067 Ia
Pt001882 not found in 351aa AT1G78080.1 1st_1st 0.445190156 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G78080.1     MAAAMNLYTCSRSFQDSG----GELMDALVPFIKSVSDSPSSSSAASASAFLHPSAFSLP
pt001882_POPTR_ MAATMDLYSS---ISLQSDPLVGELMEALEPFMKSASSIATPSPSQTPNY---PSSPSLP
gm014755_Glyma0 MAALMDFYSSSPEFQLHSDPFRGELMEVLEPFMKSPS----------PNYF--PSSPSLP
                *** *::*:.   :.  .    ****:.* **:** *          ..    **: ***

AT1G78080.1     PLPG----------------------YYPD---STFLTQPFSY----------GSDLQQT
pt001882_POPTR_ SLPSTSYDYFFSFSTPSHLQQQQQPFLYPDVCCSTSTAYPFSTGFSIND----AMGLQQP
gm014755_Glyma0 NL--------------------------------------YSNGLSSNTQSLIGFGQAQP
                 *                                      :*           . .  *.

AT1G78080.1     GSLIGLNNLSSSQIHQIQSQIHHPLPPTHHNNNNSFS---------NLLSPKPLLMKQSG
pt001882_POPTR_ SSSIGLNHLTPNQIHQIQTQI-------HQNNSHSYLRTCQQPQTLKFLSPKPVPMKQ--
gm014755_Glyma0 TSLVGLNHLTPSQISQIQAQIQIQ-AQQHQNRSN----------TLSFLGPKPIPMKH--
                 * :***:*:..** ***:**       *:*..:            .:*.***: **:  

AT1G78080.1     VAGSCFAYGSGVPSKPTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYD
pt001882_POPTR_ ---------MGTPSKSTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYD
gm014755_Glyma0 ---------AGMPPKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYD
                          * *.*.**********************:*********************

AT1G78080.1     KAAYKLRGDFARLNFPNLRHNGSHIGGDFGEYKPLHSSVDAKLEAICKSM--AETQKQDK
pt001882_POPTR_ KAAYKLRGDFARLNFPNLRHQGSHI----GEYKPLHSSVDAKLQAICESLENSSQQKRGK
gm014755_Glyma0 KAAYKLRGDFARLNFPNLRHQGSSVGGDFGEYKPLHSAVDAKLQAICEGL--AELQKQGK
                ********************:** :    ********:*****:***:.:  :. **:.*

AT1G78080.1     STKSSKKREKKVSSPDLSEKVKAEENSVSIGGSPPVTEFEESTAGSSPLSDLTFADPEEP
pt001882_POPTR_ VEKRSNSTK-KETSLVVGT--QEEEPVVKSETPSPVLTESDGSGGSSPLSDLTFPDIEEA
gm014755_Glyma0 TEKPPRKSRSKLAEKVVSD--KENNNSCKVEAASW------SSEGSSPLSDLTFADVSEA
                  * ... . * :.  :.   : ::   .   ..       .: **********.* .*.

AT1G78080.1     PQWNET--FSLEKYPSYEIDWDSILA
pt001882_POPTR_ PLEFDSGNFMLQKYPSYEIDWASILS
gm014755_Glyma0 QWEGDSDNYNLQKYPSYEIDWDSL--
                    ::  : *:********* *:
BoxShade v3.31 C (beta, 970507) Output
AT1G78080.1     M A A A M N L Y T C S R S F Q D S G - - - - G E L M D A L V P F I K S V S D S P S S S S A A S A S A F L H P S A F S L P
pt001882_POPTR_    M A A T M D L Y S S - - - I S L Q S D P L V G E L M E A L E P F M K S A S S I A T P S P S Q T P N Y - - - P S S P S L P
gm014755_Glyma0    M A A L M D F Y S S S P E F Q L H S D P F R G E L M E V L E P F M K S P S - - - - - - - - - - P N Y F - - P S S P S L P
 
AT1G78080.1     P L P G - - - - - - - - - - - - - - - - - - - - - - Y Y P D - - - S T F L T Q P F S Y - - - - - - - - - - G S D L Q Q T
pt001882_POPTR_    S L P S T S Y D Y F F S F S T P S H L Q Q Q Q Q P F L Y P D V C C S T S T A Y P F S T G F S I N D - - - - A M G L Q Q P
gm014755_Glyma0    N L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Y S N G L S S N T Q S L I G F G Q A Q P
 
AT1G78080.1     G S L I G L N N L S S S Q I H Q I Q S Q I H H P L P P T H H N N N N S F S - - - - - - - - - N L L S P K P L L M K Q S G
pt001882_POPTR_    S S S I G L N H L T P N Q I H Q I Q T Q I - - - - - - - H Q N N S H S Y L R T C Q Q P Q T L K F L S P K P V P M K Q - -
gm014755_Glyma0    T S L V G L N H L T P S Q I S Q I Q A Q I Q I Q - A Q Q H Q N R S N - - - - - - - - - - T L S F L G P K P I P M K H - -
 
AT1G78080.1     V A G S C F A Y G S G V P S K P T K L Y R G V R Q R H W G K W V A E I R L P R N R T R L W L G T F D T A E E A A L A Y D
pt001882_POPTR_    - - - - - - - - - M G T P S K S T K L Y R G V R Q R H W G K W V A E I R L P K N R T R L W L G T F D T A E E A A L A Y D
gm014755_Glyma0    - - - - - - - - - A G M P P K P T K L Y R G V R Q R H W G K W V A E I R L P K N R T R L W L G T F D T A E E A A L A Y D
 
AT1G78080.1     K A A Y K L R G D F A R L N F P N L R H N G S H I G G D F G E Y K P L H S S V D A K L E A I C K S M - - A E T Q K Q D K
pt001882_POPTR_    K A A Y K L R G D F A R L N F P N L R H Q G S H I - - - - G E Y K P L H S S V D A K L Q A I C E S L E N S S Q Q K R G K
gm014755_Glyma0    K A A Y K L R G D F A R L N F P N L R H Q G S S V G G D F G E Y K P L H S A V D A K L Q A I C E G L - - A E L Q K Q G K
 
AT1G78080.1     S T K S S K K R E K K V S S P D L S E K V K A E E N S V S I G G S P P V T E F E E S T A G S S P L S D L T F A D P E E P
pt001882_POPTR_    V E K R S N S T K - K E T S L V V G T - - Q E E E P V V K S E T P S P V L T E S D G S G G S S P L S D L T F P D I E E A
gm014755_Glyma0    T E K P P R K S R S K L A E K V V S D - - K E N N N S C K V E A A S W - - - - - - S S E G S S P L S D L T F A D V S E A
 
AT1G78080.1     P Q W N E T - - F S L E K Y P S Y E I D W D S I L A
pt001882_POPTR_    P L E F D S G N F M L Q K Y P S Y E I D W A S I L S
gm014755_Glyma0    Q W E G D S D N Y N L Q K Y P S Y E I D W D S L - -
 
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