fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G78080.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt001882 not found in 351aa AT1G78080.1 1st_1st 0.445190156 Ia
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G78080.1     MAAAMNLYTCSRSFQDSG--GELMDALVPFIKSVSD--SPSSSSAASASAFLHPSAFSLP
pt001882_POPTR_ MAATMDLYS-SISLQSDPLVGELMEALEPFMKSASSIATPSPSQTPN-----YPSSPSLP
                ***:*:**: * *:*..   ****:** **:**.*.  :**.*.:..     :**: ***

AT1G78080.1     PLPG----------------------YYPD---STFLTQPFSYGSD------LQQTGSLI
pt001882_POPTR_ SLPSTSYDYFFSFSTPSHLQQQQQPFLYPDVCCSTSTAYPFSTGFSINDAMGLQQPSSSI
                .**.                       ***   **  : *** * .      ***..* *

AT1G78080.1     GLNNLSSSQIHQIQSQIHHPLPPTHHNNNNSFSNL-----------LSPKPLLMKQSGVA
pt001882_POPTR_ GLNHLTPNQIHQIQTQIHQ---------NNSHSYLRTCQQPQTLKFLSPKPVPMKQ----
                ***:*:..******:***:         ***.* *           *****: ***    

AT1G78080.1     GSCFAYGSGVPSKPTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDKA
pt001882_POPTR_ -------MGTPSKSTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKA
                        *.***.**********************:***********************

AT1G78080.1     AYKLRGDFARLNFPNLRHNGSHIGGDFGEYKPLHSSVDAKLEAICKSMAETQKQ-----D
pt001882_POPTR_ AYKLRGDFARLNFPNLRHQGSHI----GEYKPLHSSVDAKLQAICESLENSSQQKRGKVE
                ******************:****    **************:***:*: ::.:*     :

AT1G78080.1     KSTKSSKKREKKVSSPDLSEKVKAEENSVSIGGSPPVTEFEESTAGSSPLSDLTFADPEE
pt001882_POPTR_ KRSNSTKKETSLVVGTQEEEPVVKSETP-----SPVLTE-SDGSGGSSPLSDLTFPDIEE
                * ::*:**. . * ..: .* *  .*..     ** :** .:.:.**********.* **

AT1G78080.1     PPQWNET--FSLEKYPSYEIDWDSILA
pt001882_POPTR_ APLEFDSGNFMLQKYPSYEIDWASILS
                .*   ::  * *:********* ***:
BoxShade v3.31 C (beta, 970507) Output
AT1G78080.1     M A A A M N L Y T C S R S F Q D S G - - G E L M D A L V P F I K S V S D - - S P S S S S A A S A S A F L H P S A F S L P
pt001882_POPTR_    M A A T M D L Y S - S I S L Q S D P L V G E L M E A L E P F M K S A S S I A T P S P S Q T P N - - - - - Y P S S P S L P
 
AT1G78080.1     P L P G - - - - - - - - - - - - - - - - - - - - - - Y Y P D - - - S T F L T Q P F S Y G S D - - - - - - L Q Q T G S L I
pt001882_POPTR_    S L P S T S Y D Y F F S F S T P S H L Q Q Q Q Q P F L Y P D V C C S T S T A Y P F S T G F S I N D A M G L Q Q P S S S I
 
AT1G78080.1     G L N N L S S S Q I H Q I Q S Q I H H P L P P T H H N N N N S F S N L - - - - - - - - - - - L S P K P L L M K Q S G V A
pt001882_POPTR_    G L N H L T P N Q I H Q I Q T Q I H Q - - - - - - - - - N N S H S Y L R T C Q Q P Q T L K F L S P K P V P M K Q - - - -
 
AT1G78080.1     G S C F A Y G S G V P S K P T K L Y R G V R Q R H W G K W V A E I R L P R N R T R L W L G T F D T A E E A A L A Y D K A
pt001882_POPTR_    - - - - - - - M G T P S K S T K L Y R G V R Q R H W G K W V A E I R L P K N R T R L W L G T F D T A E E A A L A Y D K A
 
AT1G78080.1     A Y K L R G D F A R L N F P N L R H N G S H I G G D F G E Y K P L H S S V D A K L E A I C K S M A E T Q K Q - - - - - D
pt001882_POPTR_    A Y K L R G D F A R L N F P N L R H Q G S H I - - - - G E Y K P L H S S V D A K L Q A I C E S L E N S S Q Q K R G K V E
 
AT1G78080.1     K S T K S S K K R E K K V S S P D L S E K V K A E E N S V S I G G S P P V T E F E E S T A G S S P L S D L T F A D P E E
pt001882_POPTR_    K R S N S T K K E T S L V V G T Q E E E P V V K S E T P - - - - - S P V L T E - S D G S G G S S P L S D L T F P D I E E
 
AT1G78080.1     P P Q W N E T - - F S L E K Y P S Y E I D W D S I L A
pt001882_POPTR_    A P L E F D S G N F M L Q K Y P S Y E I D W A S I L S
 
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