fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G78080.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm009529 not found in 314aa AT1G78080.1 not_1st 0.472035794 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G78080.1     MAAAMNLYTCSRSFQDSG----GELMDALVPFIKSVSDSPSSSSAASASAFLHPSAFSLP
gm009529_Glyma0 MAAMMDFYSSSTEFQLHSDPFRGELMEVLEPFMK----SPFSTPSPSNSCFL---STSYS
                *** *::*:.* .**  .    ****:.* **:*    ** *:.:.* *.**   : * .

AT1G78080.1     PLPGYY------------PDSTFLTQPFSYGSDLQQTGSLIGLNNLSSSQIHQIQSQIHH
gm009529_Glyma0 PSPNNYSPSLYSNGLSSIPNTTQNLIGFGQG----QPTSLVGLNHLTPSQISQIQAQIQ-
                * *. *            *::*     *. *    *. **:***:*:.*** ***:**: 

AT1G78080.1     PLPPTHHNNNNSFSNLLSPKPLLMKQSGVAGSCFAYGSGVPSKPTKLYRGVRQRHWGKWV
gm009529_Glyma0 ---IQNHSNTLSF---LGPKPIPMKH-----------VGMPPKPTKLYRGVRQRHWGKWV
                     :*.*. **   *.***: **:            *:*.******************

AT1G78080.1     AEIRLPRNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPNLRHNGSHIGGDFGEY
gm009529_Glyma0 AEIRLPKNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPNLRHQGSSVGGDFGEY
                ******:*****************************************:** :*******

AT1G78080.1     KPLHSSVDAKLEAICKSMAETQKQDKSTKSSKKREKKVSSPDLSEKVKAEENSVSIGGSP
gm009529_Glyma0 KPLHSAVDAKLQAICEGLAELQKQGKTEKPPRKTRSKLASP-------PENDNNNDNNSC
                *****:*****:***:.:** ***.*: *..:* ..*::**       .*::. . ..* 

AT1G78080.1     PVTEFEESTAGSSPLSDLTFADPEEPPQW---NETFSLEKYPSYEIDWDSILA
gm009529_Glyma0 KVEAASSSSEGSSPLSVLTFADVSE-PQWEGDSDNFNLQKYPSYEIDWDSL--
                 *   ..*: ****** ***** .* ***   .:.*.*:***********:
BoxShade v3.31 C (beta, 970507) Output
AT1G78080.1     M A A A M N L Y T C S R S F Q D S G - - - - G E L M D A L V P F I K S V S D S P S S S S A A S A S A F L H P S A F S L P
gm009529_Glyma0    M A A M M D F Y S S S T E F Q L H S D P F R G E L M E V L E P F M K - - - - S P F S T P S P S N S C F L - - - S T S Y S
 
AT1G78080.1     P L P G Y Y - - - - - - - - - - - - P D S T F L T Q P F S Y G S D L Q Q T G S L I G L N N L S S S Q I H Q I Q S Q I H H
gm009529_Glyma0    P S P N N Y S P S L Y S N G L S S I P N T T Q N L I G F G Q G - - - - Q P T S L V G L N H L T P S Q I S Q I Q A Q I Q -
 
AT1G78080.1     P L P P T H H N N N N S F S N L L S P K P L L M K Q S G V A G S C F A Y G S G V P S K P T K L Y R G V R Q R H W G K W V
gm009529_Glyma0    - - - I Q N H S N T L S F - - - L G P K P I P M K H - - - - - - - - - - - V G M P P K P T K L Y R G V R Q R H W G K W V
 
AT1G78080.1     A E I R L P R N R T R L W L G T F D T A E E A A L A Y D K A A Y K L R G D F A R L N F P N L R H N G S H I G G D F G E Y
gm009529_Glyma0    A E I R L P K N R T R L W L G T F D T A E E A A L A Y D K A A Y K L R G D F A R L N F P N L R H Q G S S V G G D F G E Y
 
AT1G78080.1     K P L H S S V D A K L E A I C K S M A E T Q K Q D K S T K S S K K R E K K V S S P D L S E K V K A E E N S V S I G G S P
gm009529_Glyma0    K P L H S A V D A K L Q A I C E G L A E L Q K Q G K T E K P P R K T R S K L A S P - - - - - - - P E N D N N N D N N S C
 
AT1G78080.1     P V T E F E E S T A G S S P L S D L T F A D P E E P P Q W - - - N E T F S L E K Y P S Y E I D W D S I L A
gm009529_Glyma0    K V E A A S S S S E G S S P L S V L T F A D V S E - P Q W E G D S D N F N L Q K Y P S Y E I D W D S L - -
 
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