fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G78080.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm014755 not found in 302aa AT1G78080.1 1st_1st 0.476510067 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G78080.1     MAAAMNLYTCSRSFQDSG----GELMDALVPFIKSVSDSPSSSSAASASAFLHPSAFSLP
gm014755_Glyma0 MAALMDFYSSSPEFQLHSDPFRGELMEVLEPFMKS-------------------------
                *** *::*:.* .**  .    ****:.* **:**                         

AT1G78080.1     PLPGYYPDSTFLTQPFSYG--SDLQ--------QTGSLIGLNNLSSSQIHQIQSQIHHPL
gm014755_Glyma0 PSPNYFPSSPSLPNLYSNGLSSNTQSLIGFGQAQPTSLVGLNHLTPSQISQIQAQIQ--I
                * *.*:*.*. *.: :* *  *: *        *. **:***:*:.*** ***:**:  :

AT1G78080.1     PPTHHNNNNSFSNLLSPKPLLMKQSGVAGSCFAYGSGVPSKPTKLYRGVRQRHWGKWVAE
gm014755_Glyma0 QAQQHQNRSNTLSFLGPKPIPMKH-----------AGMPPKPTKLYRGVRQRHWGKWVAE
                 . :*:*...  .:*.***: **:           :*:*.********************

AT1G78080.1     IRLPRNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPNLRHNGSHIGGDFGEYKP
gm014755_Glyma0 IRLPKNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPNLRHQGSSVGGDFGEYKP
                ****:*****************************************:** :*********

AT1G78080.1     LHSSVDAKLEAICKSMAETQKQDKSTKSSKKREKKVSSPDLSEKV---KAEENSVSIGGS
gm014755_Glyma0 LHSAVDAKLQAICEGLAELQKQGKTEKPPRKSRSK-----LAEKVVSDKENNNSCKVEAA
                ***:*****:***:.:** ***.*: *..:* ..*     *:***   * ::** .: .:

AT1G78080.1     PPVTEFEESTAGSSPLSDLTFADPEEPPQW---NETFSLEKYPSYEIDWDSILA
gm014755_Glyma0 ------SWSSEGSSPLSDLTFADVSE-AQWEGDSDNYNLQKYPSYEIDWDSL--
                      . *: ************ .* .**   .:.:.*:***********:
BoxShade v3.31 C (beta, 970507) Output
AT1G78080.1     M A A A M N L Y T C S R S F Q D S G - - - - G E L M D A L V P F I K S V S D S P S S S S A A S A S A F L H P S A F S L P
gm014755_Glyma0    M A A L M D F Y S S S P E F Q L H S D P F R G E L M E V L E P F M K S - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT1G78080.1     P L P G Y Y P D S T F L T Q P F S Y G - - S D L Q - - - - - - - - Q T G S L I G L N N L S S S Q I H Q I Q S Q I H H P L
gm014755_Glyma0    P S P N Y F P S S P S L P N L Y S N G L S S N T Q S L I G F G Q A Q P T S L V G L N H L T P S Q I S Q I Q A Q I Q - - I
 
AT1G78080.1     P P T H H N N N N S F S N L L S P K P L L M K Q S G V A G S C F A Y G S G V P S K P T K L Y R G V R Q R H W G K W V A E
gm014755_Glyma0    Q A Q Q H Q N R S N T L S F L G P K P I P M K H - - - - - - - - - - - A G M P P K P T K L Y R G V R Q R H W G K W V A E
 
AT1G78080.1     I R L P R N R T R L W L G T F D T A E E A A L A Y D K A A Y K L R G D F A R L N F P N L R H N G S H I G G D F G E Y K P
gm014755_Glyma0    I R L P K N R T R L W L G T F D T A E E A A L A Y D K A A Y K L R G D F A R L N F P N L R H Q G S S V G G D F G E Y K P
 
AT1G78080.1     L H S S V D A K L E A I C K S M A E T Q K Q D K S T K S S K K R E K K V S S P D L S E K V - - - K A E E N S V S I G G S
gm014755_Glyma0    L H S A V D A K L Q A I C E G L A E L Q K Q G K T E K P P R K S R S K - - - - - L A E K V V S D K E N N N S C K V E A A
 
AT1G78080.1     P P V T E F E E S T A G S S P L S D L T F A D P E E P P Q W - - - N E T F S L E K Y P S Y E I D W D S I L A
gm014755_Glyma0    - - - - - - S W S S E G S S P L S D L T F A D V S E - A Q W E G D S D N Y N L Q K Y P S Y E I D W D S L - -
 
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