fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G78080.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm014755 not found in 302aa AT1G78080.1 1st_1st 0.476510067 Ia
Gm009529 not found in 314aa AT1G78080.1 not_1st 0.472035794 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G78080.1     MAAAMNLYTCSRSFQDSG----GELMDALVPFIKSVSDSPSSSSAASASAFLHPSAFSLP
gm009529_Glyma0 MAAMMDFYSSSTEFQLHSDPFRGELMEVLEPFMKSPFSTPSPSNSCFLSTSYSPSPNNYS
gm014755_Glyma0 MAALMDFYSSSPEFQLHSDPFRGELMEVLEPFMKSP------------SPNYFPSSPSL-
                *** *::*:.* .**  .    ****:.* **:**             *.   **. .  

AT1G78080.1     PLPGYYPD--STF--LTQPFSYGSDLQQTGSLIGLNNLSSSQIHQIQSQIHHPLPPTHHN
gm009529_Glyma0 --PSLYSNGLSSIPNTTQNL-IGFGQGQPTSLVGLNHLTPSQISQIQAQIQI------QN
gm014755_Glyma0 --PNLYSNGLSS---NTQSL-IGFGQAQPTSLVGLNHLTPSQISQIQAQIQIQ-AQQHQN
                  *. *.:  *:    ** :  * .  *. **:***:*:.*** ***:**:       :*

AT1G78080.1     NNNSFSNLLSPKPLLMKQSGVAGSCFAYGSGVPSKPTKLYRGVRQRHWGKWVAEIRLPRN
gm009529_Glyma0 HSNTLS-FLGPKPIPMKH-----------VGMPPKPTKLYRGVRQRHWGKWVAEIRLPKN
gm014755_Glyma0 RSNTLS-FLGPKPIPMKH-----------AGMPPKPTKLYRGVRQRHWGKWVAEIRLPKN
                ..*::* :*.***: **:            *:*.************************:*

AT1G78080.1     RTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPNLRHNGSHIGGDFGEYKPLHSSVD
gm009529_Glyma0 RTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPNLRHQGSSVGGDFGEYKPLHSAVD
gm014755_Glyma0 RTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPNLRHQGSSVGGDFGEYKPLHSAVD
                ****************************************:** :************:**

AT1G78080.1     AKLEAICKSMAETQKQDKSTKSSKKREKKVSSPDLSEKVKAEENSVSIGGSPPVTEFEES
gm009529_Glyma0 AKLQAICEGLAELQKQGKTEKPPRKTRSKLASPPENDNNN-DNNSCKVEAA------SSS
gm014755_Glyma0 AKLQAICEGLAELQKQGKTEKPPRKSRSKLAEKVVSDKEN--NNSCKVEAA------SWS
                ***:***:.:** ***.*: *..:* ..*::.   .:: :  :** .: .:      . *

AT1G78080.1     TAGSSPLSDLTFADPEEPPQW---NETFSLEKYPSYEIDWDSILA
gm009529_Glyma0 SEGSSPLSVLTFADVSE-PQWEGDSDNFNLQKYPSYEIDWDSL--
gm014755_Glyma0 SEGSSPLSDLTFADVSE-AQWEGDSDNYNLQKYPSYEIDWDSL--
                : ****** ***** .* .**   .:.:.*:***********:
BoxShade v3.31 C (beta, 970507) Output
AT1G78080.1     M A A A M N L Y T C S R S F Q D S G - - - - G E L M D A L V P F I K S V S D S P S S S S A A S A S A F L H P S A F S L P
gm009529_Glyma0    M A A M M D F Y S S S T E F Q L H S D P F R G E L M E V L E P F M K S P F S T P S P S N S C F L S T S Y S P S P N N Y S
gm014755_Glyma0    M A A L M D F Y S S S P E F Q L H S D P F R G E L M E V L E P F M K S P - - - - - - - - - - - - S P N Y F P S S P S L -
 
AT1G78080.1     P L P G Y Y P D - - S T F - - L T Q P F S Y G S D L Q Q T G S L I G L N N L S S S Q I H Q I Q S Q I H H P L P P T H H N
gm009529_Glyma0    - - P S L Y S N G L S S I P N T T Q N L - I G F G Q G Q P T S L V G L N H L T P S Q I S Q I Q A Q I Q I - - - - - - Q N
gm014755_Glyma0    - - P N L Y S N G L S S - - - N T Q S L - I G F G Q A Q P T S L V G L N H L T P S Q I S Q I Q A Q I Q I Q - A Q Q H Q N
 
AT1G78080.1     N N N S F S N L L S P K P L L M K Q S G V A G S C F A Y G S G V P S K P T K L Y R G V R Q R H W G K W V A E I R L P R N
gm009529_Glyma0    H S N T L S - F L G P K P I P M K H - - - - - - - - - - - V G M P P K P T K L Y R G V R Q R H W G K W V A E I R L P K N
gm014755_Glyma0    R S N T L S - F L G P K P I P M K H - - - - - - - - - - - A G M P P K P T K L Y R G V R Q R H W G K W V A E I R L P K N
 
AT1G78080.1     R T R L W L G T F D T A E E A A L A Y D K A A Y K L R G D F A R L N F P N L R H N G S H I G G D F G E Y K P L H S S V D
gm009529_Glyma0    R T R L W L G T F D T A E E A A L A Y D K A A Y K L R G D F A R L N F P N L R H Q G S S V G G D F G E Y K P L H S A V D
gm014755_Glyma0    R T R L W L G T F D T A E E A A L A Y D K A A Y K L R G D F A R L N F P N L R H Q G S S V G G D F G E Y K P L H S A V D
 
AT1G78080.1     A K L E A I C K S M A E T Q K Q D K S T K S S K K R E K K V S S P D L S E K V K A E E N S V S I G G S P P V T E F E E S
gm009529_Glyma0    A K L Q A I C E G L A E L Q K Q G K T E K P P R K T R S K L A S P P E N D N N N - D N N S C K V E A A - - - - - - S S S
gm014755_Glyma0    A K L Q A I C E G L A E L Q K Q G K T E K P P R K S R S K L A E K V V S D K E N - - N N S C K V E A A - - - - - - S W S
 
AT1G78080.1     T A G S S P L S D L T F A D P E E P P Q W - - - N E T F S L E K Y P S Y E I D W D S I L A
gm009529_Glyma0    S E G S S P L S V L T F A D V S E - P Q W E G D S D N F N L Q K Y P S Y E I D W D S L - -
gm014755_Glyma0    S E G S S P L S D L T F A D V S E - A Q W E G D S D N Y N L Q K Y P S Y E I D W D S L - -
 
0