fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G78600.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm024565 not found in 292aa AT1G78600.1 1st_1st 0.470692717 Ia
Pt025651 not found in 298aa AT1G78600.1 1st_1st 0.536412078 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G78600.1     MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDIC
pt025651_POPTR_ MKIQCNVCEAAEAKVLCCADEAALCWTCDEKVHAANKLASKHQRIPLSTSSPQMPKCDIC
gm024565_Glyma0 MKIQCNVCEAAEAKVLCCADEAALCWECDEKVHAANKLASKHQRVPLSLSASHMPKCDIC
                *************.************ ****:*******.****:*** *:. :******

AT1G78600.1     QEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESIDTGPSTKS--S
pt025651_POPTR_ QETAGFFFCLEDRALLCRKCDVAIHTANTHVSVHQRFLLTGVKVGLEPTDPGASSSSGKS
gm024565_Glyma0 QEMVGYFFCLEDRALLCRNCDVSIHTANACVSDHQRFLLTGVRVGLEATERGASSSSVKS
                **  *:****:*******:***:***.*. ** ********::****. : *.*:.*  *

AT1G78600.1     PTNDDKTMETKPF-----VQSIPEPQKMAFDHHHHQQQQEQQEGVIPGTKVNDQTSTKLP
pt025651_POPTR_ PSGEKKTLETKSRPVSRRGTLLPLANPC------NQVSTVNVCG------VGDFGPAKLP
gm024565_Glyma0 QSGEKMS-DAKSSSISRNVSSLPQPSNA------NEVLPLQMQG------VEEFPPSNF-
                 :.:. : ::*.         :* ..        ::    :  *      * :  .::: 

AT1G78600.1     LVSSGSTTGSIPQWQIEEIFGLTDFDQSYEYMENNGSSKADTSRRGDSDSSSMMRSAEED
pt025651_POPTR_ Y-SGGSATSSISQWHIDEFLDLPEFNQNYGYID-NGSSKADSGKRGDSDCSAILRSTEEE
gm024565_Glyma0 ---SGYTSGNVSQWPIEEFLGLNELSQYYNYMD--GSSKADSGKLGDSD-SSVLRSGEED
                   .* ::..:.** *:*::.* ::.* * *::  ******:.: **** *:::** **:

AT1G78600.1     GEDNNNCLGG--ETSWAVPQIQSPPTASGLNWPKHFHHHS---VFVPDITSSTPYTGSSP
pt025651_POPTR_ -VDDEECLGQVPDSSRAVPQIPSPPTASGLYWPKSFHNHSETAIFVPDICCSVVQNCHYS
gm024565_Glyma0 -MDDDGFLGRVPDSSWTVPQIPSPPTASGLYWPKVPQYTSDSAMSVPDICFSHVRQPHHA
                  *::  **   ::* :**** ******** ***  :  *   : ****  *       .

AT1G78600.1     NQR--VGKRRRRF
pt025651_POPTR_ EQRGTVSKRQRQL
gm024565_Glyma0 QHNSNVSKRRRQL
                ::.  *.**:*::
BoxShade v3.31 C (beta, 970507) Output
AT1G78600.1     M K I Q C N V C E A A E A T V L C C A D E A A L C W A C D E K I H A A N K L A G K H Q R V P L S A S A S S I P K C D I C
pt025651_POPTR_    M K I Q C N V C E A A E A K V L C C A D E A A L C W T C D E K V H A A N K L A S K H Q R I P L S T S S P Q M P K C D I C
gm024565_Glyma0    M K I Q C N V C E A A E A K V L C C A D E A A L C W E C D E K V H A A N K L A S K H Q R V P L S L S A S H M P K C D I C
 
AT1G78600.1     Q E A S G F F F C L Q D R A L L C R K C D V A I H T V N P H V S A H Q R F L L T G I K V G L E S I D T G P S T K S - - S
pt025651_POPTR_    Q E T A G F F F C L E D R A L L C R K C D V A I H T A N T H V S V H Q R F L L T G V K V G L E P T D P G A S S S S G K S
gm024565_Glyma0    Q E M V G Y F F C L E D R A L L C R N C D V S I H T A N A C V S D H Q R F L L T G V R V G L E A T E R G A S S S S V K S
 
AT1G78600.1     P T N D D K T M E T K P F - - - - - V Q S I P E P Q K M A F D H H H H Q Q Q Q E Q Q E G V I P G T K V N D Q T S T K L P
pt025651_POPTR_    P S G E K K T L E T K S R P V S R R G T L L P L A N P C - - - - - - N Q V S T V N V C G - - - - - - V G D F G P A K L P
gm024565_Glyma0    Q S G E K M S - D A K S S S I S R N V S S L P Q P S N A - - - - - - N E V L P L Q M Q G - - - - - - V E E F P P S N F -
 
AT1G78600.1     L V S S G S T T G S I P Q W Q I E E I F G L T D F D Q S Y E Y M E N N G S S K A D T S R R G D S D S S S M M R S A E E D
pt025651_POPTR_    Y - S G G S A T S S I S Q W H I D E F L D L P E F N Q N Y G Y I D - N G S S K A D S G K R G D S D C S A I L R S T E E E
gm024565_Glyma0    - - - S G Y T S G N V S Q W P I E E F L G L N E L S Q Y Y N Y M D - - G S S K A D S G K L G D S D - S S V L R S G E E D
 
AT1G78600.1     G E D N N N C L G G - - E T S W A V P Q I Q S P P T A S G L N W P K H F H H H S - - - V F V P D I T S S T P Y T G S S P
pt025651_POPTR_    - V D D E E C L G Q V P D S S R A V P Q I P S P P T A S G L Y W P K S F H N H S E T A I F V P D I C C S V V Q N C H Y S
gm024565_Glyma0    - M D D D G F L G R V P D S S W T V P Q I P S P P T A S G L Y W P K V P Q Y T S D S A M S V P D I C F S H V R Q P H H A
 
AT1G78600.1     N Q R - - V G K R R R R F
pt025651_POPTR_    E Q R G T V S K R Q R Q L
gm024565_Glyma0    Q H N S N V S K R R R Q L
 
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