fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G78600.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp024421 not found in 338aa AT1G78600.1 1st_1st 0.289520426 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G78600.1     MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDIC
pp024421_Pp1s50 MRVHCDVCEKNKAAVMCCADEAALCTACDTRVHAANKLANKHVRVPLVGQLEP-PRCDIC
                *:::*:***  :*:*:********* *** ::*******.** **** .. .. *:****

AT1G78600.1     QEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESID----------
pp024421_Pp1s50 QDKAGFFFCLEDRALLCRDCDVSIHSSNKLSSNHQRFLITGTRVGLDAVSGQEGTERMSE
                *: :******:*******.***:**: *   * *****:** :***:::.          

AT1G78600.1     ---------------TGPSTKSSPTNDDKTMETKPFVQSIPEPQKMAFDHHHHQQQQEQQ
pp024421_Pp1s50 ESPRVSSLTTVTKSPSPPASKSSPSSASKM----NMVSVKPQPAPT------NATSNANP
                               : *::****:. .*      :*.  *:*         :  .: : 

AT1G78600.1     EGVIPGTKVNDQTSTKLPLVSSGSTTG----------------------SIPQWQIEEIF
pp024421_Pp1s50 SWLSNGGRYTEREKTK--LLSVGTTSANVVDPHSSSFGRRNSIPADLSDAVPVWGVDELL
                . :  * : .:: .**  *:* *:*:.                      ::* * ::*::

AT1G78600.1     GLTDFDQSYEYMENNGSSKADTSRRGDSDSSSMMRSAEEDGEDNNNCLGGETSWAVPQIQ
pp024421_Pp1s50 NLPELADGY-HLGDIGSSKADMNNLGDCDWMADLSMFEEQ-------IYAETLRKVPQMF
                .*.:: :.* :: : ****** .. **.*  : :   **:       : .**   ***: 

AT1G78600.1     SPPTASGLNW-------------------PKHFHHHSVFVPDITSSTPYTGSSPNQRVGK
pp024421_Pp1s50 APAPTAGLSRGGRATVLSKGKGKQEAAIVPQ--FDDAFVVPDLGLSASALLPAP---VAK
                :*..::**.                    *:  ...:..***:  *:.   .:*   *.*

AT1G78600.1     RRRRF
pp024421_Pp1s50 RRRT-
                ***
BoxShade v3.31 C (beta, 970507) Output
AT1G78600.1     M K I Q C N V C E A A E A T V L C C A D E A A L C W A C D E K I H A A N K L A G K H Q R V P L S A S A S S I P K C D I C
pp024421_Pp1s50    M R V H C D V C E K N K A A V M C C A D E A A L C T A C D T R V H A A N K L A N K H V R V P L V G Q L E P - P R C D I C
 
AT1G78600.1     Q E A S G F F F C L Q D R A L L C R K C D V A I H T V N P H V S A H Q R F L L T G I K V G L E S I D - - - - - - - - - -
pp024421_Pp1s50    Q D K A G F F F C L E D R A L L C R D C D V S I H S S N K L S S N H Q R F L I T G T R V G L D A V S G Q E G T E R M S E
 
AT1G78600.1     - - - - - - - - - - - - - - - T G P S T K S S P T N D D K T M E T K P F V Q S I P E P Q K M A F D H H H H Q Q Q Q E Q Q
pp024421_Pp1s50    E S P R V S S L T T V T K S P S P P A S K S S P S S A S K M - - - - N M V S V K P Q P A P T - - - - - - N A T S N A N P
 
AT1G78600.1     E G V I P G T K V N D Q T S T K L P L V S S G S T T G - - - - - - - - - - - - - - - - - - - - - - S I P Q W Q I E E I F
pp024421_Pp1s50    S W L S N G G R Y T E R E K T K - - L L S V G T T S A N V V D P H S S S F G R R N S I P A D L S D A V P V W G V D E L L
 
AT1G78600.1     G L T D F D Q S Y E Y M E N N G S S K A D T S R R G D S D S S S M M R S A E E D G E D N N N C L G G E T S W A V P Q I Q
pp024421_Pp1s50    N L P E L A D G Y - H L G D I G S S K A D M N N L G D C D W M A D L S M F E E Q - - - - - - - I Y A E T L R K V P Q M F
 
AT1G78600.1     S P P T A S G L N W - - - - - - - - - - - - - - - - - - - P K H F H H H S V F V P D I T S S T P Y T G S S P N Q R V G K
pp024421_Pp1s50    A P A P T A G L S R G G R A T V L S K G K G K Q E A A I V P Q - - F D D A F V V P D L G L S A S A L L P A P - - - V A K
 
AT1G78600.1     R R R R F
pp024421_Pp1s50    R R R T -
 
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