fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G78600.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt030266 not found in 297aa AT1G78600.1 not_1st 0.529307282 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G78600.1     MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDIC
pt030266_POPTR_ MKIQCNVCEAAEANVLCCADEAALCRACDETVHAANKLASKHQRVPLSTSSPQIPKCDIC
                *************.*********** ****.:*******.********:*:..*******

AT1G78600.1     QEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESIDTGPSTK--SS
pt030266_POPTR_ QEAAGFFFCLEDRALLCRKCDVAIHTANTHVSAHQRFLLTGVKVGLESTDPGASSSPGKS
                ***:******:***************.*.************:****** *.*.*:.  .*

AT1G78600.1     PTNDDKTMETKPFVQSIPEPQK---MAFDHHHHQQQQEQQEGVIPGT--KVNDQTSTKLP
pt030266_POPTR_ PSGEITTLKTK----SCPVSRRGTSMPLASPCNQ--------VFPANVCGVGEFVPAKLP
                *:.: .*::**    * * .::   *.:    :*        *:*..   *.: ..:***

AT1G78600.1     LVSSGSTTGSIPQWQIEEIFGLTDFDQSYEYMENNGSSKADTSRRGDSDSSSMMRSAEED
pt030266_POPTR_ Y-SGGSAASSISQWQIDEFLELAEFNQHYGYMD-NGSSKADSGKHGDSDCSAILRSAEEE
                  *.**::.**.****:*:: *::*:* * **: *******:.::****.*:::*****:

AT1G78600.1     GEDNNNCLGG--ETSWAVPQIQSPPTASGLNWPKHFHHH--SVFVPDITSSTPYTGSSPN
pt030266_POPTR_ -VDDEECLGQVPDSSWAVPQIPSPPTASGLYWPKSIHHSDTAIFVPDICGSAVQNHRHCQ
                  *:::***   ::******* ******** *** :**   ::***** .*:  .    :

AT1G78600.1     QR--VGKRRRRF
pt030266_POPTR_ QRGTVSKWRQQL
                **  *.* *:::
BoxShade v3.31 C (beta, 970507) Output
AT1G78600.1     M K I Q C N V C E A A E A T V L C C A D E A A L C W A C D E K I H A A N K L A G K H Q R V P L S A S A S S I P K C D I C
pt030266_POPTR_    M K I Q C N V C E A A E A N V L C C A D E A A L C R A C D E T V H A A N K L A S K H Q R V P L S T S S P Q I P K C D I C
 
AT1G78600.1     Q E A S G F F F C L Q D R A L L C R K C D V A I H T V N P H V S A H Q R F L L T G I K V G L E S I D T G P S T K - - S S
pt030266_POPTR_    Q E A A G F F F C L E D R A L L C R K C D V A I H T A N T H V S A H Q R F L L T G V K V G L E S T D P G A S S S P G K S
 
AT1G78600.1     P T N D D K T M E T K P F V Q S I P E P Q K - - - M A F D H H H H Q Q Q Q E Q Q E G V I P G T - - K V N D Q T S T K L P
pt030266_POPTR_    P S G E I T T L K T K - - - - S C P V S R R G T S M P L A S P C N Q - - - - - - - - V F P A N V C G V G E F V P A K L P
 
AT1G78600.1     L V S S G S T T G S I P Q W Q I E E I F G L T D F D Q S Y E Y M E N N G S S K A D T S R R G D S D S S S M M R S A E E D
pt030266_POPTR_    Y - S G G S A A S S I S Q W Q I D E F L E L A E F N Q H Y G Y M D - N G S S K A D S G K H G D S D C S A I L R S A E E E
 
AT1G78600.1     G E D N N N C L G G - - E T S W A V P Q I Q S P P T A S G L N W P K H F H H H - - S V F V P D I T S S T P Y T G S S P N
pt030266_POPTR_    - V D D E E C L G Q V P D S S W A V P Q I P S P P T A S G L Y W P K S I H H S D T A I F V P D I C G S A V Q N H R H C Q
 
AT1G78600.1     Q R - - V G K R R R R F
pt030266_POPTR_    Q R G T V S K W R Q Q L
 
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