fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G78600.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt025651 not found in 298aa AT1G78600.1 1st_1st 0.536412078 Ia
Pt030266 not found in 297aa AT1G78600.1 not_1st 0.529307282 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G78600.1     MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDIC
pt030266_POPTR_ MKIQCNVCEAAEANVLCCADEAALCRACDETVHAANKLASKHQRVPLSTSSPQIPKCDIC
pt025651_POPTR_ MKIQCNVCEAAEAKVLCCADEAALCWTCDEKVHAANKLASKHQRIPLSTSSPQMPKCDIC
                *************.*********** :***.:*******.****:***:*:..:******

AT1G78600.1     QEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESIDTGPSTKS--S
pt030266_POPTR_ QEAAGFFFCLEDRALLCRKCDVAIHTANTHVSAHQRFLLTGVKVGLESTDPGASSSPGKS
pt025651_POPTR_ QETAGFFFCLEDRALLCRKCDVAIHTANTHVSVHQRFLLTGVKVGLEPTDPGASSSSGKS
                **::******:***************.*.***.********:*****. *.*.*:..  *

AT1G78600.1     PTNDDKTMETKPFVQSIPEPQK---MAFDHHHHQQQQEQQEGVIPGTKVNDQTSTKLPLV
pt030266_POPTR_ PSGEITTLKTK----SCPVSRRGTSMPLASPCNQVFPANVCG------VGEFVPAKLPY-
pt025651_POPTR_ PSGEKKTLETK----SRPVSRRGTLLPLANPCNQVSTVNVCG------VGDFGPAKLPY-
                *:.: .*::**    * * .::   :.:    :*    :  *      *.:  .:***  

AT1G78600.1     SSGSTTGSIPQWQIEEIFGLTDFDQSYEYMENNGSSKADTSRRGDSDSSSMMRSAEEDGE
pt030266_POPTR_ SGGSAASSISQWQIDEFLELAEFNQHYGYMD-NGSSKADSGKHGDSDCSAILRSAEEE-V
pt025651_POPTR_ SGGSATSSISQWHIDEFLDLPEFNQNYGYID-NGSSKADSGKRGDSDCSAILRSTEEE-V
                *.**::.**.**:*:*:: *.:*:* * *:: *******:.::****.*:::**:**:  

AT1G78600.1     DNNNCLGG--ETSWAVPQIQSPPTASGLNWPKHFHHHS---VFVPDITSSTPYTGSSPNQ
pt030266_POPTR_ DDEECLGQVPDSSWAVPQIPSPPTASGLYWPKSIH-HSDTAIFVPDICGSAVQNHRHCQQ
pt025651_POPTR_ DDEECLGQVPDSSRAVPQIPSPPTASGLYWPKSFHNHSETAIFVPDICCSVVQNCHYSEQ
                *:::***   ::* ***** ******** *** :* **   :*****  *.  .    :*

AT1G78600.1     R--VGKRRRRF
pt030266_POPTR_ RGTVSKWRQQL
pt025651_POPTR_ RGTVSKRQRQL
                *  *.* ::::
BoxShade v3.31 C (beta, 970507) Output
AT1G78600.1     M K I Q C N V C E A A E A T V L C C A D E A A L C W A C D E K I H A A N K L A G K H Q R V P L S A S A S S I P K C D I C
pt030266_POPTR_    M K I Q C N V C E A A E A N V L C C A D E A A L C R A C D E T V H A A N K L A S K H Q R V P L S T S S P Q I P K C D I C
pt025651_POPTR_    M K I Q C N V C E A A E A K V L C C A D E A A L C W T C D E K V H A A N K L A S K H Q R I P L S T S S P Q M P K C D I C
 
AT1G78600.1     Q E A S G F F F C L Q D R A L L C R K C D V A I H T V N P H V S A H Q R F L L T G I K V G L E S I D T G P S T K S - - S
pt030266_POPTR_    Q E A A G F F F C L E D R A L L C R K C D V A I H T A N T H V S A H Q R F L L T G V K V G L E S T D P G A S S S P G K S
pt025651_POPTR_    Q E T A G F F F C L E D R A L L C R K C D V A I H T A N T H V S V H Q R F L L T G V K V G L E P T D P G A S S S S G K S
 
AT1G78600.1     P T N D D K T M E T K P F V Q S I P E P Q K - - - M A F D H H H H Q Q Q Q E Q Q E G V I P G T K V N D Q T S T K L P L V
pt030266_POPTR_    P S G E I T T L K T K - - - - S C P V S R R G T S M P L A S P C N Q V F P A N V C G - - - - - - V G E F V P A K L P Y -
pt025651_POPTR_    P S G E K K T L E T K - - - - S R P V S R R G T L L P L A N P C N Q V S T V N V C G - - - - - - V G D F G P A K L P Y -
 
AT1G78600.1     S S G S T T G S I P Q W Q I E E I F G L T D F D Q S Y E Y M E N N G S S K A D T S R R G D S D S S S M M R S A E E D G E
pt030266_POPTR_    S G G S A A S S I S Q W Q I D E F L E L A E F N Q H Y G Y M D - N G S S K A D S G K H G D S D C S A I L R S A E E E - V
pt025651_POPTR_    S G G S A T S S I S Q W H I D E F L D L P E F N Q N Y G Y I D - N G S S K A D S G K R G D S D C S A I L R S T E E E - V
 
AT1G78600.1     D N N N C L G G - - E T S W A V P Q I Q S P P T A S G L N W P K H F H H H S - - - V F V P D I T S S T P Y T G S S P N Q
pt030266_POPTR_    D D E E C L G Q V P D S S W A V P Q I P S P P T A S G L Y W P K S I H - H S D T A I F V P D I C G S A V Q N H R H C Q Q
pt025651_POPTR_    D D E E C L G Q V P D S S R A V P Q I P S P P T A S G L Y W P K S F H N H S E T A I F V P D I C C S V V Q N C H Y S E Q
 
AT1G78600.1     R - - V G K R R R R F
pt030266_POPTR_    R G T V S K W R Q Q L
pt025651_POPTR_    R G T V S K R Q R Q L
 
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