fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G78600.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm024565 not found in 292aa AT1G78600.1 1st_1st 0.470692717 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G78600.1     MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDIC
gm024565_Glyma0 MKIQCNVCEAAEAKVLCCADEAALCWECDEKVHAANKLASKHQRVPLSLSASHMPKCDIC
                *************.************ ****:*******.******** *** :******

AT1G78600.1     QEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESIDTGPSTKSSPT
gm024565_Glyma0 QEMVGYFFCLEDRALLCRNCDVSIHTANACVSDHQRFLLTGVRVGLEATERGASSSSVKS
                **  *:****:*******:***:***.*. ** ********::****: : *.*:.*  :

AT1G78600.1     ------NDDKTMETKPFVQSIPEPQKMAFDHHHHQQQQEQQEGV--IPGTKVNDQTSTKL
gm024565_Glyma0 QSGEKMSDAKSSSISRNVSSLPQPS------NANEVLPLQMQGVEEFP------------
                      .* *: . .  *.*:*:*.      : ::    * :**  :*            

AT1G78600.1     PLVSSGSTTGSIPQWQIEEIFGLTDFDQSYEYMENNGSSKADTSRRGDSDSSSMMRSAEE
gm024565_Glyma0 PSNFSGYTSGNVSQWPIEEFLGLNELSQYYNYMD--GSSKADSGKLGDSD-SSVLRSGEE
                *   ** *:*.:.** ***::**.::.* *:**:  ******:.: **** **::**.**

AT1G78600.1     DGEDNNNCLG--GETSWAVPQIQSPPTASGLNWPK---HFHHHSVFVPDITSS---TPYT
gm024565_Glyma0 D-MDDDGFLGRVPDSSWTVPQIPSPPTASGLYWPKVPQYTSDSAMSVPDICFSHVRQPHH
                *  *::. **   ::**:**** ******** ***   :  . :: ****  *    *: 

AT1G78600.1     GSSPNQRVGKRRRRF
gm024565_Glyma0 AQH-NSNVSKRRRQL
                ..  *..*.****::
BoxShade v3.31 C (beta, 970507) Output
AT1G78600.1     M K I Q C N V C E A A E A T V L C C A D E A A L C W A C D E K I H A A N K L A G K H Q R V P L S A S A S S I P K C D I C
gm024565_Glyma0    M K I Q C N V C E A A E A K V L C C A D E A A L C W E C D E K V H A A N K L A S K H Q R V P L S L S A S H M P K C D I C
 
AT1G78600.1     Q E A S G F F F C L Q D R A L L C R K C D V A I H T V N P H V S A H Q R F L L T G I K V G L E S I D T G P S T K S S P T
gm024565_Glyma0    Q E M V G Y F F C L E D R A L L C R N C D V S I H T A N A C V S D H Q R F L L T G V R V G L E A T E R G A S S S S V K S
 
AT1G78600.1     - - - - - - N D D K T M E T K P F V Q S I P E P Q K M A F D H H H H Q Q Q Q E Q Q E G V - - I P G T K V N D Q T S T K L
gm024565_Glyma0    Q S G E K M S D A K S S S I S R N V S S L P Q P S - - - - - - N A N E V L P L Q M Q G V E E F P - - - - - - - - - - - -
 
AT1G78600.1     P L V S S G S T T G S I P Q W Q I E E I F G L T D F D Q S Y E Y M E N N G S S K A D T S R R G D S D S S S M M R S A E E
gm024565_Glyma0    P S N F S G Y T S G N V S Q W P I E E F L G L N E L S Q Y Y N Y M D - - G S S K A D S G K L G D S D - S S V L R S G E E
 
AT1G78600.1     D G E D N N N C L G - - G E T S W A V P Q I Q S P P T A S G L N W P K - - - H F H H H S V F V P D I T S S - - - T P Y T
gm024565_Glyma0    D - M D D D G F L G R V P D S S W T V P Q I P S P P T A S G L Y W P K V P Q Y T S D S A M S V P D I C F S H V R Q P H H
 
AT1G78600.1     G S S P N Q R V G K R R R R F
gm024565_Glyma0    A Q H - N S N V S K R R R Q L
 
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