fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G78700.1 ESGSDDLELTLGNSST at 313/325 in AT1G78700.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os000898 DSGSDDLELTLGSSRT in 351/365 AT1G78700.1 1st_1st 0.575757575 Ia
Sb024553 not found in 526aa AT1G78700.1 1st_1st 0.553030303 Ia
Gm037328 EFGSDDLELTLGNSKT in 314/325 AT1G78700.1 1st_1st 0.708333333 Ia
Pt030017 ECGSDDLELTLGNSRT in 317/328 AT1G78700.1 1st_1st 0.704545454 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G78700.1     --------MTSG-------------------------TRMPTWRERENNKRRERRRRAIA
pt030017_POPTR_ --------MTSG-------------------------TRLPTWKERENNKRRERRRRAIA
Sb024553_Sorbi1 AGARAGRDMASGGGGGA--------GGGLGAA--GAGGRMPTWRERENNKRRERRRRAIA
gm037328_Glyma1 --------MTSG-------------------------TRLPTSKERENNKRRERRRRAIA
Os000898_Os01t0 --------MATGGGGGGGGMGGGGVGGGAGAAGVGVGGRMPTWRERENNKRRERRRRAIA
                        *::*                          *:** :****************

AT1G78700.1     AKIFTGLRMYGNYELPKHCDNNEVLKALCNEAGWIVEPDGTTYRKGCSRPVERMEIGGGS
pt030017_POPTR_ AKIFSGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEPDGTTFRKGC-KPVERMDILGVS
Sb024553_Sorbi1 AKIFAGLRAHGGYKLPKHCDNNEVLKALCNEAGWVVEPDGTTYRKGS-KPMERMDHIGCS
gm037328_Glyma1 AKIFAGLRMYGNFKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGC-KPLERMDIVGGS
Os000898_Os01t0 AKIFAGLRAHGGYKLPKHCDNNEVLKALCNEAGWVVEPDGTTYRKGY-KPPERMEVIGCS
                ****:*** :*.::******************** *******:***  :* ***:  * *

AT1G78700.1     ATASPCSSYQPSPCASYNPSPGSSNFMSPASSSFANLTS------GDGQSLIPWLKHLST
pt030017_POPTR_ ATTSPCSSYHPSPCASYNPSPGSSSFPSPASSSYAANAN------MDCNSLIPWLKNLSS
Sb024553_Sorbi1 VSPSPCSSYQVSPRASYNASPTSSSFPSGASSPFLP-PNEMVNGGIDGNPILPWLKTFSN
gm037328_Glyma1 SAASPCSSYHPSPCASYNPSPGSSSFPSPSSSPYTQIPN------ADGNSLIPWLKNLST
Os000898_Os01t0 VSPSPCSSYQPSPRASYNASPTSSSFPSGASSPFLPHPNNMAN-GVDGNPILPWLKTLSN
                 :.******: ** ****.** **.* * :**.:   ..       * :.::**** :*.

AT1G78700.1     TSSSSASSSSRLPNYLYIPGGSISAPVTPPLSSPTARTPRMNTDWQ----------QLNN
pt030017_POPTR_ ASSS--ASSSKFP-HLYIHGGSISAPVTPPLSSPTARTARIKADWEDQSIRPGWG-GQHY
Sb024553_Sorbi1 GTPS--KKHPLLP-PLLIHGGSISAPVTPPLSSPSARTPRMKTDWDEATIQPPWH-GANS
gm037328_Glyma1 ASSS--ASSPKLP-HLYLHSGSISAPVTPPLSSPTSRTPRINVEWDEQSARPGWTRQQHY
Os000898_Os01t0 SPSS--KKHPQLP-PLLIHGGSISAPVTPPLSSPTARTPRMKTDWDESNVQPTWT-GSNS
                 ..*   . . :*  * : .**************::**.*::.:*:            : 

AT1G78700.1     SFFVSSTPPSPTRQIIPDSEWFSGIQLAQSVPASPTFSLVSQNPFG-FKEEAASAAGGGG
pt030017_POPTR_ SFLPSSTPPSPGRQIVPDPEWFRGIRIPQGGPTSPTFSLVASNPFG-FKEEAFGGGGSNG
Sb024553_Sorbi1 PTIVNSTPPSPGRSIAPDPAWLAGIQISSTSPNSPTFSLVSTNPFSVFKESIPVG---NS
gm037328_Glyma1 SFLPSSSPPSPGRQVV-DPEWFAGIKLPHVSPTSPTFSLVSSNPFA-FKEDGLPG----S
Os000898_Os01t0 PCVVNSTPPSPGRTMLPDPAWLAGIQISSTSPSSPTFSLVSSNPFSVFKDAILVG---NN
                . . .*:**** * :  *. *: **::.   * *******: ***. **:    .    .

AT1G78700.1     GSRMWTPGQSGTCSPAIPPGADQTADVPMSEAVAPPEFAFGSNTN------GLVKAWEGE
pt030017_POPTR_ GSRMWTPGQSGTCSPAIAAGSDHTADIPMAE-IS-DEFAFRCNAT------GLVKPWEGE
Sb024553_Sorbi1 SSRMCTPGQSGTCSPAI-PGMLQHSDVHMMDAVS-DEFAFGSSTNGAQQAAGLVRAWEGE
gm037328_Glyma1 GSRMWTPAQSGTCSPAIPPGSDQNADIPMSEAVS-DEFAFGSNTL------GLVKPWEGE
Os000898_Os01t0 SSRMCTPGQSGTCSPAI-PGMAPHPDIHMMDAVS-DEFAFGSSTNGGHQAAGLVRAWEGE
                .*** **.********* .*    .*: * : ::  **** ..:       ***:.****

AT1G78700.1     RIHEESGSDDLELTLGNSSTR---
pt030017_POPTR_ RIHEECGSDDLELTLGNSRTR---
Sb024553_Sorbi1 RIHEDSGSDDLELTLKL-------
gm037328_Glyma1 RIHEEFGSDDLELTLGNSKTR---
Os000898_Os01t0 RIHEDSGSDDLELTLGSSRTRAAA
                ****: *********
BoxShade v3.31 C (beta, 970507) Output
AT1G78700.1     - - - - - - - - M T S G - - - - - - - - - - - - - - - - - - - - - - - - - T R M P T W R E R E N N K R R E R R R R A I A
pt030017_POPTR_    - - - - - - - - M T S G - - - - - - - - - - - - - - - - - - - - - - - - - T R L P T W K E R E N N K R R E R R R R A I A
Sb024553_Sorbi1    A G A R A G R D M A S G G G G G A - - - - - - - - G G G L G A A - - G A G G R M P T W R E R E N N K R R E R R R R A I A
gm037328_Glyma1    - - - - - - - - M T S G - - - - - - - - - - - - - - - - - - - - - - - - - T R L P T S K E R E N N K R R E R R R R A I A
Os000898_Os01t0    - - - - - - - - M A T G G G G G G G G M G G G G V G G G A G A A G V G V G G R M P T W R E R E N N K R R E R R R R A I A
 
AT1G78700.1     A K I F T G L R M Y G N Y E L P K H C D N N E V L K A L C N E A G W I V E P D G T T Y R K G C S R P V E R M E I G G G S
pt030017_POPTR_    A K I F S G L R M Y G N Y K L P K H C D N N E V L K A L C N E A G W T V E P D G T T F R K G C - K P V E R M D I L G V S
Sb024553_Sorbi1    A K I F A G L R A H G G Y K L P K H C D N N E V L K A L C N E A G W V V E P D G T T Y R K G S - K P M E R M D H I G C S
gm037328_Glyma1    A K I F A G L R M Y G N F K L P K H C D N N E V L K A L C N E A G W T V E P D G T T Y R K G C - K P L E R M D I V G G S
Os000898_Os01t0    A K I F A G L R A H G G Y K L P K H C D N N E V L K A L C N E A G W V V E P D G T T Y R K G Y - K P P E R M E V I G C S
 
AT1G78700.1     A T A S P C S S Y Q P S P C A S Y N P S P G S S N F M S P A S S S F A N L T S - - - - - - G D G Q S L I P W L K H L S T
pt030017_POPTR_    A T T S P C S S Y H P S P C A S Y N P S P G S S S F P S P A S S S Y A A N A N - - - - - - M D C N S L I P W L K N L S S
Sb024553_Sorbi1    V S P S P C S S Y Q V S P R A S Y N A S P T S S S F P S G A S S P F L P - P N E M V N G G I D G N P I L P W L K T F S N
gm037328_Glyma1    S A A S P C S S Y H P S P C A S Y N P S P G S S S F P S P S S S P Y T Q I P N - - - - - - A D G N S L I P W L K N L S T
Os000898_Os01t0    V S P S P C S S Y Q P S P R A S Y N A S P T S S S F P S G A S S P F L P H P N N M A N - G V D G N P I L P W L K T L S N
 
AT1G78700.1     T S S S S A S S S S R L P N Y L Y I P G G S I S A P V T P P L S S P T A R T P R M N T D W Q - - - - - - - - - - Q L N N
pt030017_POPTR_    A S S S - - A S S S K F P - H L Y I H G G S I S A P V T P P L S S P T A R T A R I K A D W E D Q S I R P G W G - G Q H Y
Sb024553_Sorbi1    G T P S - - K K H P L L P - P L L I H G G S I S A P V T P P L S S P S A R T P R M K T D W D E A T I Q P P W H - G A N S
gm037328_Glyma1    A S S S - - A S S P K L P - H L Y L H S G S I S A P V T P P L S S P T S R T P R I N V E W D E Q S A R P G W T R Q Q H Y
Os000898_Os01t0    S P S S - - K K H P Q L P - P L L I H G G S I S A P V T P P L S S P T A R T P R M K T D W D E S N V Q P T W T - G S N S
 
AT1G78700.1     S F F V S S T P P S P T R Q I I P D S E W F S G I Q L A Q S V P A S P T F S L V S Q N P F G - F K E E A A S A A G G G G
pt030017_POPTR_    S F L P S S T P P S P G R Q I V P D P E W F R G I R I P Q G G P T S P T F S L V A S N P F G - F K E E A F G G G G S N G
Sb024553_Sorbi1    P T I V N S T P P S P G R S I A P D P A W L A G I Q I S S T S P N S P T F S L V S T N P F S V F K E S I P V G - - - N S
gm037328_Glyma1    S F L P S S S P P S P G R Q V V - D P E W F A G I K L P H V S P T S P T F S L V S S N P F A - F K E D G L P G - - - - S
Os000898_Os01t0    P C V V N S T P P S P G R T M L P D P A W L A G I Q I S S T S P S S P T F S L V S S N P F S V F K D A I L V G - - - N N
 
AT1G78700.1     G S R M W T P G Q S G T C S P A I P P G A D Q T A D V P M S E A V A P P E F A F G S N T N - - - - - - G L V K A W E G E
pt030017_POPTR_    G S R M W T P G Q S G T C S P A I A A G S D H T A D I P M A E - I S - D E F A F R C N A T - - - - - - G L V K P W E G E
Sb024553_Sorbi1    S S R M C T P G Q S G T C S P A I - P G M L Q H S D V H M M D A V S - D E F A F G S S T N G A Q Q A A G L V R A W E G E
gm037328_Glyma1    G S R M W T P A Q S G T C S P A I P P G S D Q N A D I P M S E A V S - D E F A F G S N T L - - - - - - G L V K P W E G E
Os000898_Os01t0    S S R M C T P G Q S G T C S P A I - P G M A P H P D I H M M D A V S - D E F A F G S S T N G G H Q A A G L V R A W E G E
 
AT1G78700.1     R I H E E S G S D D L E L T L G N S S T R - - -
pt030017_POPTR_    R I H E E C G S D D L E L T L G N S R T R - - -
Sb024553_Sorbi1    R I H E D S G S D D L E L T L K L - - - - - - -
gm037328_Glyma1    R I H E E F G S D D L E L T L G N S K T R - - -
Os000898_Os01t0    R I H E D S G S D D L E L T L G S S R T R A A A
 
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