fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G78700.1 ESGSDDLELTLGNSST at 313/325 in AT1G78700.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp030985 not found in 197aa AT1G78700.1 1st_1st 0.287878787 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G78700.1     MTSGTRMPTWRERENNKRRERRRRAIAAKIFTGLRMYGNYELPKHCDNNEVLKALCNEAG
pp030985_Pp1s33 MTSGTRLPTWKERENNKRRERRRRAIAAKIFAGLRLYGNYKLPKHCDNNEVLKALCVEAG
                ******:***:********************:***:****:*************** ***

AT1G78700.1     WIVEPDGTTYRKGCSRPVERMEIGGGSATASPCSSYQPSPCASYNPSPGSSNFMSPASSS
pp030985_Pp1s33 WTVEEDGTTYRKGSKPPAQPMEVCTSPSEASPTSSY-----------PGAA---------
                * ** ********.. *.: **:  ..: *** ***           **::         

AT1G78700.1     FANLTSGDGQSLIPWLKHLST---TSSSSASSSSRLPNYLYIPGGSISAPVTPPLSSPTA
pp030985_Pp1s33 -------EGTSLIPWLKGLSSNGGSGTATPSSSAGLPPLHVMHGGSSSAPVTPPLSSPTH
                       :* ******* **:   :.:::.***: **    : *** ************ 

AT1G78700.1     RTPRMNTDWQQLNNSFFVSSTPPSPTRQIIPDSEWFSGIQLAQSVPASPTFSLVSQNPFG
pp030985_Pp1s33 RGPPVKPDWDHIKD----------------------------------------------
                * * ::.**:::::                                              

AT1G78700.1     FKEEAASAAGGGGGSRMWTPGQSGTCSPAIPPGADQTADVPMSEAVAPPEFAFGSNTNGL
pp030985_Pp1s33 ------------------------------------------------------------
                                                                            

AT1G78700.1     VKAWEGERIHEESGSDDLELT---------LGNSSTR
pp030985_Pp1s33 VKLWVFQAVHLK----DVGLVSVVVRDTDWMANT---
                ** *  : :* :    *: *.         :.*:
BoxShade v3.31 C (beta, 970507) Output
AT1G78700.1     M T S G T R M P T W R E R E N N K R R E R R R R A I A A K I F T G L R M Y G N Y E L P K H C D N N E V L K A L C N E A G
pp030985_Pp1s33    M T S G T R L P T W K E R E N N K R R E R R R R A I A A K I F A G L R L Y G N Y K L P K H C D N N E V L K A L C V E A G
 
AT1G78700.1     W I V E P D G T T Y R K G C S R P V E R M E I G G G S A T A S P C S S Y Q P S P C A S Y N P S P G S S N F M S P A S S S
pp030985_Pp1s33    W T V E E D G T T Y R K G S K P P A Q P M E V C T S P S E A S P T S S Y - - - - - - - - - - - P G A A - - - - - - - - -
 
AT1G78700.1     F A N L T S G D G Q S L I P W L K H L S T - - - T S S S S A S S S S R L P N Y L Y I P G G S I S A P V T P P L S S P T A
pp030985_Pp1s33    - - - - - - - E G T S L I P W L K G L S S N G G S G T A T P S S S A G L P P L H V M H G G S S S A P V T P P L S S P T H
 
AT1G78700.1     R T P R M N T D W Q Q L N N S F F V S S T P P S P T R Q I I P D S E W F S G I Q L A Q S V P A S P T F S L V S Q N P F G
pp030985_Pp1s33    R G P P V K P D W D H I K D - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT1G78700.1     F K E E A A S A A G G G G G S R M W T P G Q S G T C S P A I P P G A D Q T A D V P M S E A V A P P E F A F G S N T N G L
pp030985_Pp1s33    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT1G78700.1     V K A W E G E R I H E E S G S D D L E L T - - - - - - - - - L G N S S T R
pp030985_Pp1s33    V K L W V F Q A V H L K - - - - D V G L V S V V V R D T D W M A N T - - -
 
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