fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G78700.1 ESGSDDLELTLGNSST at 313/325 in AT1G78700.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os000898 DSGSDDLELTLGSSRT in 351/365 AT1G78700.1 1st_1st 0.575757575 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G78700.1     -------------------------MTSGTRMPTWRERENNKRRERRRRAIAAKIFTGLR
Os000898_Os01t0 MATGGGGGGGGMGGGGVGGGAGAAGVGVGGRMPTWRERENNKRRERRRRAIAAKIFAGLR
                                         :  * **************************:***

AT1G78700.1     MYGNYELPKHCDNNEVLKALCNEAGWIVEPDGTTYRKGCSRPVERMEIGGGSATASPCSS
Os000898_Os01t0 AHGGYKLPKHCDNNEVLKALCNEAGWVVEPDGTTYRKG-YKPPERMEVIGCSVSPSPCSS
                 :*.*:********************:***********  :* ****: * *.:.*****

AT1G78700.1     YQPSPCASYNPSPGSSNFMSPASSSFA----NLTSG-DGQSLIPWLKHLSTTSSSSASSS
Os000898_Os01t0 YQPSPRASYNASPTSSSFPSGASSPFLPHPNNMANGVDGNPILPWLKTLS--NSPSSKKH
                ***** ****.** **.* * ***.*     *::.* **:.::**** **  .*.*:.. 

AT1G78700.1     SRLPNYLYIPGGSISAPVTPPLSSPTARTPRMNTDWQQLN--------NS-FFVSSTPPS
Os000898_Os01t0 PQLPP-LLIHGGSISAPVTPPLSSPTARTPRMKTDWDESNVQPTWTGSNSPCVVNSTPPS
                .:**  * * **********************:***:: *        **  .*.*****

AT1G78700.1     PTRQIIPDSEWFSGIQLAQSVPASPTFSLVSQNPFGFKEEAASAAGGGGGSRMWTPGQSG
Os000898_Os01t0 PGRTMLPDPAWLAGIQISSTSPSSPTFSLVSSNPFSVFKDAILV--GNNSSRMCTPGQSG
                * * ::**. *::***::.: *:********.***.. ::*  .  *...*** ******

AT1G78700.1     TCSPAIPPGADQTADVPMSEAVAPPEFAFGSNTN------GLVKAWEGERIHEESGSDDL
Os000898_Os01t0 TCSPAI-PGMAPHPDIHMMDAVS-DEFAFGSSTNGGHQAAGLVRAWEGERIHEDSGSDDL
                ****** **    .*: * :**:  ******.**      ***:*********:******

AT1G78700.1     ELTLGNSSTR---
Os000898_Os01t0 ELTLGSSRTRAAA
                *****.* **
BoxShade v3.31 C (beta, 970507) Output
AT1G78700.1     - - - - - - - - - - - - - - - - - - - - - - - - - M T S G T R M P T W R E R E N N K R R E R R R R A I A A K I F T G L R
Os000898_Os01t0    M A T G G G G G G G G M G G G G V G G G A G A A G V G V G G R M P T W R E R E N N K R R E R R R R A I A A K I F A G L R
 
AT1G78700.1     M Y G N Y E L P K H C D N N E V L K A L C N E A G W I V E P D G T T Y R K G C S R P V E R M E I G G G S A T A S P C S S
Os000898_Os01t0    A H G G Y K L P K H C D N N E V L K A L C N E A G W V V E P D G T T Y R K G - Y K P P E R M E V I G C S V S P S P C S S
 
AT1G78700.1     Y Q P S P C A S Y N P S P G S S N F M S P A S S S F A - - - - N L T S G - D G Q S L I P W L K H L S T T S S S S A S S S
Os000898_Os01t0    Y Q P S P R A S Y N A S P T S S S F P S G A S S P F L P H P N N M A N G V D G N P I L P W L K T L S - - N S P S S K K H
 
AT1G78700.1     S R L P N Y L Y I P G G S I S A P V T P P L S S P T A R T P R M N T D W Q Q L N - - - - - - - - N S - F F V S S T P P S
Os000898_Os01t0    P Q L P P - L L I H G G S I S A P V T P P L S S P T A R T P R M K T D W D E S N V Q P T W T G S N S P C V V N S T P P S
 
AT1G78700.1     P T R Q I I P D S E W F S G I Q L A Q S V P A S P T F S L V S Q N P F G F K E E A A S A A G G G G G S R M W T P G Q S G
Os000898_Os01t0    P G R T M L P D P A W L A G I Q I S S T S P S S P T F S L V S S N P F S V F K D A I L V - - G N N S S R M C T P G Q S G
 
AT1G78700.1     T C S P A I P P G A D Q T A D V P M S E A V A P P E F A F G S N T N - - - - - - G L V K A W E G E R I H E E S G S D D L
Os000898_Os01t0    T C S P A I - P G M A P H P D I H M M D A V S - D E F A F G S S T N G G H Q A A G L V R A W E G E R I H E D S G S D D L
 
AT1G78700.1     E L T L G N S S T R - - -
Os000898_Os01t0    E L T L G S S R T R A A A
 
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