fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G78700.1 ESGSDDLELTLGNSST at 313/325 in AT1G78700.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb024553 not found in 526aa AT1G78700.1 1st_1st 0.553030303 Ia
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G78700.1     --------MTS---------------GTRMPTWRERENNKRRERRRRAIAAKIFTGLRMY
Sb024553_Sorbi1 AGARAGRDMASGGGGGAGGGLGAAGAGGRMPTWRERENNKRRERRRRAIAAKIFAGLRAH
                        *:*               * **************************:*** :

AT1G78700.1     GNYELPKHCDNNEVLKALCNEAGWIVEPDGTTYRKGCSRPVERMEIGGGSATASPCSSYQ
Sb024553_Sorbi1 GGYKLPKHCDNNEVLKALCNEAGWVVEPDGTTYRKG-SKPMERMDHIGCSVSPSPCSSYQ
                *.*:********************:*********** *:*:***:  * *.:.*******

AT1G78700.1     PSPCASYNPSPGSSNFMSPASSSFA---NLTSG--DGQSLIPWLKHLSTTSSSSASSSSR
Sb024553_Sorbi1 VSPRASYNASPTSSSFPSGASSPFLPPNEMVNGGIDGNPILPWLK---TFSNGTPSKKHP
                 ** ****.** **.* * ***.*    ::..*  **:.::****   * *..:.*..  

AT1G78700.1     LPNYLYIPGGSISAPVTPPLSSPTARTPRMNTDWQQ---------LNNSFFVSSTPPSPT
Sb024553_Sorbi1 LLPPLLIHGGSISAPVTPPLSSPSARTPRMKTDWDEATIQPPWHGANSPTIVNSTPPSPG
                *   * * ***************:******:***::          *.. :*.****** 

AT1G78700.1     RQIIPDSEWFSGIQLAQSVPASPTFSLVSQNPFG-FKEEAASAAGGGGGSRMWTPGQSGT
Sb024553_Sorbi1 RSIAPDPAWLAGIQISSTSPNSPTFSLVSTNPFSVFKE---SIPVGNSSSRMCTPGQSGT
                *.* **. *::***::.: * ******** ***. ***   * . *...*** *******

AT1G78700.1     CSPAIPPGADQTADVPMSEAVAPPEFAFGSNTN------GLVKAWEGERIHEESGSDDLE
Sb024553_Sorbi1 CSPAI-PGMLQHSDVHMMDAVS-DEFAFGSSTNGAQQAAGLVRAWEGERIHEDSGSDDLE
                ***** **  * :** * :**:  ******.**      ***:*********:*******

AT1G78700.1     LTLGNSSTR
Sb024553_Sorbi1 LTLKL----
                ***
BoxShade v3.31 C (beta, 970507) Output
AT1G78700.1     - - - - - - - - M T S - - - - - - - - - - - - - - - G T R M P T W R E R E N N K R R E R R R R A I A A K I F T G L R M Y
Sb024553_Sorbi1    A G A R A G R D M A S G G G G G A G G G L G A A G A G G R M P T W R E R E N N K R R E R R R R A I A A K I F A G L R A H
 
AT1G78700.1     G N Y E L P K H C D N N E V L K A L C N E A G W I V E P D G T T Y R K G C S R P V E R M E I G G G S A T A S P C S S Y Q
Sb024553_Sorbi1    G G Y K L P K H C D N N E V L K A L C N E A G W V V E P D G T T Y R K G - S K P M E R M D H I G C S V S P S P C S S Y Q
 
AT1G78700.1     P S P C A S Y N P S P G S S N F M S P A S S S F A - - - N L T S G - - D G Q S L I P W L K H L S T T S S S S A S S S S R
Sb024553_Sorbi1    V S P R A S Y N A S P T S S S F P S G A S S P F L P P N E M V N G G I D G N P I L P W L K - - - T F S N G T P S K K H P
 
AT1G78700.1     L P N Y L Y I P G G S I S A P V T P P L S S P T A R T P R M N T D W Q Q - - - - - - - - - L N N S F F V S S T P P S P T
Sb024553_Sorbi1    L L P P L L I H G G S I S A P V T P P L S S P S A R T P R M K T D W D E A T I Q P P W H G A N S P T I V N S T P P S P G
 
AT1G78700.1     R Q I I P D S E W F S G I Q L A Q S V P A S P T F S L V S Q N P F G - F K E E A A S A A G G G G G S R M W T P G Q S G T
Sb024553_Sorbi1    R S I A P D P A W L A G I Q I S S T S P N S P T F S L V S T N P F S V F K E - - - S I P V G N S S S R M C T P G Q S G T
 
AT1G78700.1     C S P A I P P G A D Q T A D V P M S E A V A P P E F A F G S N T N - - - - - - G L V K A W E G E R I H E E S G S D D L E
Sb024553_Sorbi1    C S P A I - P G M L Q H S D V H M M D A V S - D E F A F G S S T N G A Q Q A A G L V R A W E G E R I H E D S G S D D L E
 
AT1G78700.1     L T L G N S S T R
Sb024553_Sorbi1    L T L K L - - - -
 
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