fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G79180.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm043201 not found in 288aa AT1G79180.1 not_1st 0.436762225 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G79180.1     MGKGRAPCCDKTKVKRGPWSPEEDIKLISFIQKFGHENWRSLPKQSGLLRCGKSCRLRWI
gm043201_Glyma1 MGKGRAPCCDKTQVKRGPWSPAEDLKLIAFIQKYGHENWRALPKQAGLLRCGKSCRLRWI
                ************:******** **:***:****:******:****:**************

AT1G79180.1     NYLRPDLKRGNFTSEEEETIIKLHHNYGNKWSKIASQLPGRTDNEIKNVWHTHLKKRLAQ
gm043201_Glyma1 NYLRPDVKRGNFTPEEEETIIRLHKALGNKWSKIASGLPGRTDNEIKNVWNTHLKKRLAP
                ******:******.*******:**:  ********* *************:******** 

AT1G79180.1     SSGTADEPASPCSSDSVSRGKDDKSSHVEDSLNRETNHRNELSTSMSSGGSNQQDDPKID
gm043201_Glyma1 K--------------KVSEQLRNYQWKIKWTRIQKNNCPTNLLTSLRIQKSHQ-------
                .              .**.   : . ::: :  ::.*  .:* **:    *:*       

AT1G79180.1     ELRFEYIEEAYSEFNDIIIQEVDKPD-LLEIPFDSDPDIWSFLDTSNSFQQSTANENSSG
gm043201_Glyma1 -FHCLLLNQTF------ILEEVDKPNHLIEIPWEPDYDFWKLLDDDNSLGSFQSNE----
                 ::   :::::      *::*****: *:***::.* *:*.:** .**: .  :**    

AT1G79180.1     SRATTEEESDEDEVKKWFKHLESELGLEEDDNQQQYKEEESSSSSLLKNYEL---MIH--
gm043201_Glyma1 --VQLEEGVHDAEAKKWSHDFENEFGVVGG------IKESSKDHFLPKNYAVEPEMDHTQ
                  .  **  .: *.*** :.:*.*:*:  .       :*.*..  * *** :   * *  

AT1G79180.1     ----------------------------
gm043201_Glyma1 AFDFDDIDMARPESELDFGCRLKHKYAV
BoxShade v3.31 C (beta, 970507) Output
AT1G79180.1     M G K G R A P C C D K T K V K R G P W S P E E D I K L I S F I Q K F G H E N W R S L P K Q S G L L R C G K S C R L R W I
gm043201_Glyma1    M G K G R A P C C D K T Q V K R G P W S P A E D L K L I A F I Q K Y G H E N W R A L P K Q A G L L R C G K S C R L R W I
 
AT1G79180.1     N Y L R P D L K R G N F T S E E E E T I I K L H H N Y G N K W S K I A S Q L P G R T D N E I K N V W H T H L K K R L A Q
gm043201_Glyma1    N Y L R P D V K R G N F T P E E E E T I I R L H K A L G N K W S K I A S G L P G R T D N E I K N V W N T H L K K R L A P
 
AT1G79180.1     S S G T A D E P A S P C S S D S V S R G K D D K S S H V E D S L N R E T N H R N E L S T S M S S G G S N Q Q D D P K I D
gm043201_Glyma1    K - - - - - - - - - - - - - - K V S E Q L R N Y Q W K I K W T R I Q K N N C P T N L L T S L R I Q K S H Q - - - - - - -
 
AT1G79180.1     E L R F E Y I E E A Y S E F N D I I I Q E V D K P D - L L E I P F D S D P D I W S F L D T S N S F Q Q S T A N E N S S G
gm043201_Glyma1    - F H C L L L N Q T F - - - - - - I L E E V D K P N H L I E I P W E P D Y D F W K L L D D D N S L G S F Q S N E - - - -
 
AT1G79180.1     S R A T T E E E S D E D E V K K W F K H L E S E L G L E E D D N Q Q Q Y K E E E S S S S S L L K N Y E L - - - M I H - -
gm043201_Glyma1    - - V Q L E E G V H D A E A K K W S H D F E N E F G V V G G - - - - - - I K E S S K D H F L P K N Y A V E P E M D H T Q
 
AT1G79180.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm043201_Glyma1    A F D F D D I D M A R P E S E L D F G C R L K H K Y A V
 
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