fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G79430.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt035028 not found in 356aa AT1G79430.2 1st_1st 0.544 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G79430.2     MFHAKKPSSMNGSYENRAMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKA
pt035028_POPTR_ MFHTKKPSTMNS--HDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKA
                ***:****:**.  .:*.*********************************:********

AT1G79430.2     TPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEYGDHSTKEGSRASAMDIQRNVASSS
pt035028_POPTR_ TPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKDFNDHSIKD---ASALDLQRSAASSS
                **********************************::.*** *:   ***:*:**..****

AT1G79430.2     GMMSRNMNEMQMEVQRRLHEQLEVQRHLQLRIEAQGKYMQSILERACQTLAG-ENMAAAT
pt035028_POPTR_ GMMSRSMNEMQMEVQRRLHEQLEVQRHLQLRTEAQGKYIQSLLEKACQTLAGDQNLAS--
                *****.************************* ******:**:**:******* :*:*:  

AT1G79430.2     AAAAVGGGYK--GNLGSSSLSA--AVGPPPHPLSFPPFQDLNIYGNTTDQVLDHHNFHHQ
pt035028_POPTR_ ------GSYKGMGNQGIPGMGAMKEFG----TLNFPAFQDLNIYGG--DQLDLQHNMDRP
                      *.**  ** * ..:.*   .*    .*.**.********.  **:  :**:.: 

AT1G79430.2     NIENHFTGNNAADTNIYLGKKRPNPNFGNDVRKGLLMWSD--QDHDLSANQSI----DDE
pt035028_POPTR_ SLDGFMPNND----NICLGKKRPSPYDGSG--KSPLIWPDDLRLQDLGSGPACLEPQDDP
                .::..:..*:    ** ******.*  *..  *. *:*.*  : :**.:. :     ** 

AT1G79430.2     HR-IQIQMA---THVSTDLDSLSEIYERKSGLSGDEGN----NGGKLLERPSPRRSPL--
pt035028_POPTR_ FKGDQIQMAPPSMDRGTDLDSISDMYEIKPALQGDALDEKKFEASAKLKRPSPRRSPLAA
                .:  *****    . .*****:*::** *..*.**  :    :..  *:*********  

AT1G79430.2     ---SPMMNPNGGLIQGRNSPFG
pt035028_POPTR_ ERMSPMIN-TGAMPQGRNSPFG
                   ***:* .*.: ********
BoxShade v3.31 C (beta, 970507) Output
AT1G79430.2     M F H A K K P S S M N G S Y E N R A M C V Q G D S G L V L T T D P K P R L R W T V E L H E R F V D A V A Q L G G P D K A
pt035028_POPTR_    M F H T K K P S T M N S - - H D R P M C V Q G D S G L V L T T D P K P R L R W T V E L H E R F V D A V T Q L G G P D K A
 
AT1G79430.2     T P K T I M R V M G V K G L T L Y H L K S H L Q K F R L G K Q P H K E Y G D H S T K E G S R A S A M D I Q R N V A S S S
pt035028_POPTR_    T P K T I M R V M G V K G L T L Y H L K S H L Q K F R L G K Q P H K D F N D H S I K D - - - A S A L D L Q R S A A S S S
 
AT1G79430.2     G M M S R N M N E M Q M E V Q R R L H E Q L E V Q R H L Q L R I E A Q G K Y M Q S I L E R A C Q T L A G - E N M A A A T
pt035028_POPTR_    G M M S R S M N E M Q M E V Q R R L H E Q L E V Q R H L Q L R T E A Q G K Y I Q S L L E K A C Q T L A G D Q N L A S - -
 
AT1G79430.2     A A A A V G G G Y K - - G N L G S S S L S A - - A V G P P P H P L S F P P F Q D L N I Y G N T T D Q V L D H H N F H H Q
pt035028_POPTR_    - - - - - - G S Y K G M G N Q G I P G M G A M K E F G - - - - T L N F P A F Q D L N I Y G G - - D Q L D L Q H N M D R P
 
AT1G79430.2     N I E N H F T G N N A A D T N I Y L G K K R P N P N F G N D V R K G L L M W S D - - Q D H D L S A N Q S I - - - - D D E
pt035028_POPTR_    S L D G F M P N N D - - - - N I C L G K K R P S P Y D G S G - - K S P L I W P D D L R L Q D L G S G P A C L E P Q D D P
 
AT1G79430.2     H R - I Q I Q M A - - - T H V S T D L D S L S E I Y E R K S G L S G D E G N - - - - N G G K L L E R P S P R R S P L - -
pt035028_POPTR_    F K G D Q I Q M A P P S M D R G T D L D S I S D M Y E I K P A L Q G D A L D E K K F E A S A K L K R P S P R R S P L A A
 
AT1G79430.2     - - - S P M M N P N G G L I Q G R N S P F G
pt035028_POPTR_    E R M S P M I N - T G A M P Q G R N S P F G
 
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