fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G79430.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb026836 not found in 502aa AT1G79430.2 1st_1st 0.424 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G79430.2     MFHAKKPSSMNG--------SYENRAMCV-QGD--SGLVLTTDPKPRLRWTVELHERFVD
Sb026836_Sorbi1 MFPSKKATSSAAAAAAAAVSSNDRQAMCVQQGDSGSGLVLTTDPKPRLRWTVELHERFVD
                ** :**.:*  .        * :.:**** ***  *************************

AT1G79430.2     AVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEYGDHSTKEGSRASA
Sb026836_Sorbi1 AVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNEHSVKDA--AAA
                **:*******************************************:.:**.*:.  *:*

AT1G79430.2     MDIQRNVASSSGMMSRNMNE----------MQMEVQRRLHEQLEVQRHLQLRIEAQGKYM
Sb026836_Sorbi1 MEMQRNAASSSGMMGRSMNDRSVHMNEAIRMQMEVQRRLHEQLEVQRHLQMRIEAQGKYM
                *::***.*******.*.**:          ********************:*********

AT1G79430.2     QSILERACQTLAGENMAAATAAAAVGGGYKGNLGSSSLSAA-------VGPPPHPLSFPP
Sb026836_Sorbi1 QSILEKAYQTIAAGDVAACPAA-----GYKSLLGNHHQAMLDVCSLKDMGP---SMGFPS
                *****:* **:*. ::**..**     ***. **.   :         :**   .:.**.

AT1G79430.2     FQDLNIYGNTTDQVLDHHNFHHQNIENHFTGNNAADTNIYLGKKRPNPNFGNDVRKGLLM
Sb026836_Sorbi1 LQDLHMYGGGGH--LDLQQQMERPMEAFFASCDIGS----LAKKRPISPYADG--KSPMM
                :***::**.  .  ** ::  .: :* .*:. : ..    *.**** . :.:.  *. :*

AT1G79430.2     WSDQDHDLSANQSIDDEHRIQIQMATHVSTD-LDSLSEIY-ERKSGLSGDE-GNNGG--K
Sb026836_Sorbi1 WCD-DED---GKGIVDQLQMAPSMMDAAGIDVMDSIADVYGDAKPMMSGDSTGSKGGFDV
                *.* *.*   .:.* *: ::  .*   .. * :**::::* : *. :***. *.:**   

AT1G79430.2     LLERPSPRRSPLSPMM--NPN--GGLIQGRNSPFG
Sb026836_Sorbi1 KLERPSPRR----PHMGGSPSVIGGGQQTRNLSYG
                 ********    * *  .*.  **  * ** .:*
BoxShade v3.31 C (beta, 970507) Output
AT1G79430.2     M F H A K K P S S M N G - - - - - - - - S Y E N R A M C V - Q G D - - S G L V L T T D P K P R L R W T V E L H E R F V D
Sb026836_Sorbi1    M F P S K K A T S S A A A A A A A A V S S N D R Q A M C V Q Q G D S G S G L V L T T D P K P R L R W T V E L H E R F V D
 
AT1G79430.2     A V A Q L G G P D K A T P K T I M R V M G V K G L T L Y H L K S H L Q K F R L G K Q P H K E Y G D H S T K E G S R A S A
Sb026836_Sorbi1    A V T Q L G G P D K A T P K T I M R V M G V K G L T L Y H L K S H L Q K F R L G K Q P H K E F N E H S V K D A - - A A A
 
AT1G79430.2     M D I Q R N V A S S S G M M S R N M N E - - - - - - - - - - M Q M E V Q R R L H E Q L E V Q R H L Q L R I E A Q G K Y M
Sb026836_Sorbi1    M E M Q R N A A S S S G M M G R S M N D R S V H M N E A I R M Q M E V Q R R L H E Q L E V Q R H L Q M R I E A Q G K Y M
 
AT1G79430.2     Q S I L E R A C Q T L A G E N M A A A T A A A A V G G G Y K G N L G S S S L S A A - - - - - - - V G P P P H P L S F P P
Sb026836_Sorbi1    Q S I L E K A Y Q T I A A G D V A A C P A A - - - - - G Y K S L L G N H H Q A M L D V C S L K D M G P - - - S M G F P S
 
AT1G79430.2     F Q D L N I Y G N T T D Q V L D H H N F H H Q N I E N H F T G N N A A D T N I Y L G K K R P N P N F G N D V R K G L L M
Sb026836_Sorbi1    L Q D L H M Y G G G G H - - L D L Q Q Q M E R P M E A F F A S C D I G S - - - - L A K K R P I S P Y A D G - - K S P M M
 
AT1G79430.2     W S D Q D H D L S A N Q S I D D E H R I Q I Q M A T H V S T D - L D S L S E I Y - E R K S G L S G D E - G N N G G - - K
Sb026836_Sorbi1    W C D - D E D - - - G K G I V D Q L Q M A P S M M D A A G I D V M D S I A D V Y G D A K P M M S G D S T G S K G G F D V
 
AT1G79430.2     L L E R P S P R R S P L S P M M - - N P N - - G G L I Q G R N S P F G
Sb026836_Sorbi1    K L E R P S P R R - - - - P H M G G S P S V I G G G Q Q T R N L S Y G
 
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