fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G79700.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm017156 not found in 287aa AT1G16060.1 1st_not 0.588235294 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G79700.2     MAKVSGRSKKTIVDDEISDKTASASESASIALTSKRKRKSPPRNAPLQRSSPYRGVTRHR
gm017156_Glyma0 MAKKSQKSLNS---------------------TGKRTRKSVPRDSPPQRSSIYRGVTRHR
                *** * :* ::                     *.**.*** **::* **** ********

AT1G79700.2     WTGRYEAHLWDKNSWNDTQTKKGRQVYLGAYDEEEAAARAYDLAALKYWGRDTLLNFPLP
gm017156_Glyma0 WTGRYEAHLWDKNCWNESQSKKGRQ---GAYDDEEAAARAYDLAALKYWGQDTILNFPLS
                *************.**::*:*****   ****:*****************:**:*****.

AT1G79700.2     SYDEDVKEMEGQSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYL
gm017156_Glyma0 NYEEKLKEMEGQSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYL
                .*:*.:******************************************************

AT1G79700.2     YLGTYATQEEAAIAYDIAAIEYRGLNAVTNFDVSRYLN-PNAAADKADSDSKPIRSPSRE
gm017156_Glyma0 YLGTYATQEEAAAAYDMAAIEYRGLNAVTNFDLSRYINWPRP---KTEENHQTI--PSNE
                ************ ***:***************:***:* *..   *::.: :.*  **.*

AT1G79700.2     PESSDDNKS--PKSEEVIEPSTSP--EVIPTRRSFPDDIQTYFGCQDSGKLATEEDVIFD
gm017156_Glyma0 NVNSNAELELGSASDEITEEGVAPSSESNPSRRTFPEDIQTIFENQDSGIYTENDDIIFG
                  .*: : .  . *:*: * ..:*  *  *:**:**:**** *  ****  : ::*:**.

AT1G79700.2     CFNSYINPGFYNEFDYGP
gm017156_Glyma0 DLGSFGAPIFHYELDV--
                 :.*:  * *: *:*
BoxShade v3.31 C (beta, 970507) Output
AT1G79700.2     M A K V S G R S K K T I V D D E I S D K T A S A S E S A S I A L T S K R K R K S P P R N A P L Q R S S P Y R G V T R H R
gm017156_Glyma0    M A K K S Q K S L N S - - - - - - - - - - - - - - - - - - - - - T G K R T R K S V P R D S P P Q R S S I Y R G V T R H R
 
AT1G79700.2     W T G R Y E A H L W D K N S W N D T Q T K K G R Q V Y L G A Y D E E E A A A R A Y D L A A L K Y W G R D T L L N F P L P
gm017156_Glyma0    W T G R Y E A H L W D K N C W N E S Q S K K G R Q - - - G A Y D D E E A A A R A Y D L A A L K Y W G Q D T I L N F P L S
 
AT1G79700.2     S Y D E D V K E M E G Q S K E E Y I G S L R R K S S G F S R G V S K Y R G V A R H H H N G R W E A R I G R V F G N K Y L
gm017156_Glyma0    N Y E E K L K E M E G Q S K E E Y I G S L R R K S S G F S R G V S K Y R G V A R H H H N G R W E A R I G R V F G N K Y L
 
AT1G79700.2     Y L G T Y A T Q E E A A I A Y D I A A I E Y R G L N A V T N F D V S R Y L N - P N A A A D K A D S D S K P I R S P S R E
gm017156_Glyma0    Y L G T Y A T Q E E A A A A Y D M A A I E Y R G L N A V T N F D L S R Y I N W P R P - - - K T E E N H Q T I - - P S N E
 
AT1G79700.2     P E S S D D N K S - - P K S E E V I E P S T S P - - E V I P T R R S F P D D I Q T Y F G C Q D S G K L A T E E D V I F D
gm017156_Glyma0    N V N S N A E L E L G S A S D E I T E E G V A P S S E S N P S R R T F P E D I Q T I F E N Q D S G I Y T E N D D I I F G
 
AT1G79700.2     C F N S Y I N P G F Y N E F D Y G P
gm017156_Glyma0    D L G S F G A P I F H Y E L D V - -
 
0