fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G79960.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm016972 not found in 244aa AT1G79960.1 1st_1st 0.221198156 Ib
Pt028946 not found in 295aa AT1G79960.1 1st_1st 0.327188940 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G79960.1     MPNPLQKSLHGYLSKIK-KETGKLQLSSSHSFSSSKNWVLG--KHPKKLSFSFKHRRRSS
gm016972_Glyma0 --MKITKSLRDYIFRIKIHQRSQIKLP-------SKKWILAACKHPRTPSLDIDNMKNNN
pt028946_POPTR_ MPKKLQKSLQDYIYKIK-NPTQNIQLSSD-SFSNSKNWILRGCKHPRTLSFAIAGNQNKS
                    : ***:.*: :** :   :::*.       **:*:*   ***:. *: :   :...

AT1G79960.1     KTRFSKEEPVYHQDSAHAATLSDIDRFLEENFKSLCIRDDQEDDQHQARVTKNKEKRESS
gm016972_Glyma0 ---VKDDE----------AMLADIDRFLFENFKSLFLDD-----REEPDNNINRRAEMSP
pt028946_POPTR_ ----RDEED---EEKGGAATLSDVDRFLFENFRSLYINDDDGNFQKESDRR-SRGGDQAP
                     .:*          * *:*:**** ***:** : *     :.:.    .:    :.

AT1G79960.1     SDDSDDDDDDDDYRHRFERTWGHAVYDSPK---QPPDLLRTERLSPPPGSSEGR------
gm016972_Glyma0 KLDP-------------------IRFDSSR------------RFFTD-------------
pt028946_POPTR_ SMNE-------------------ILIDSPRYIDQPLDLCGSHRFFVERGSSSGSLVEEAR
                . :                       **.:            *:                

AT1G79960.1     ----PSMET-----TSTSSERQSRSTL---------------VLPENCIAVLRYTDEPQE
gm016972_Glyma0 ----ATTEE-GSSSAMSESETAEESTV----------------VPGNCVVVLANSGNPSE
pt028946_POPTR_ SSLTATSENMGSSSSSSSTSVSTTSTLNDDSATVASNDPKQVRLPDDCIAVLTYSPSPYD
                    .: *      : :.:.    **:                :* :*:.**  : .* :

AT1G79960.1     DFRQSMVEMMESKLGMRESEVDWDLMEELLFCYLDLNDKKSHKFILSAFVDLIIALREKE
gm016972_Glyma0 DFQRSMEGVVEARL-RNCEKVDWDFMQELLFCHMNLNQKKSHKFILSAFVNVVTAMRSPP
pt028946_POPTR_ DFRRSMQEMVEEKL-QNNGKVDWDFMEELLLCYLNLNEKTSHKFILSAFVDLIVGLRKNP
                **::**  ::* :*  .  :****:*:***:*:::**:*.**********::: .:*.  

AT1G79960.1     K-RITRKGHVRS-LSTRAARDRLRKRMIMSDN--------
gm016972_Glyma0 EIAPPKPTPPRSVRTVRIGREVRKKTK---EAVTLEFRSQ
pt028946_POPTR_ D-----KVPVRS-RHSRIARSGGRRKL---ENVT------
                .         **    * .*.  ::     :
BoxShade v3.31 C (beta, 970507) Output
AT1G79960.1     M P N P L Q K S L H G Y L S K I K - K E T G K L Q L S S S H S F S S S K N W V L G - - K H P K K L S F S F K H R R R S S
gm016972_Glyma0    - - M K I T K S L R D Y I F R I K I H Q R S Q I K L P - - - - - - - S K K W I L A A C K H P R T P S L D I D N M K N N N
pt028946_POPTR_    M P K K L Q K S L Q D Y I Y K I K - N P T Q N I Q L S S D - S F S N S K N W I L R G C K H P R T L S F A I A G N Q N K S
 
AT1G79960.1     K T R F S K E E P V Y H Q D S A H A A T L S D I D R F L E E N F K S L C I R D D Q E D D Q H Q A R V T K N K E K R E S S
gm016972_Glyma0    - - - V K D D E - - - - - - - - - - A M L A D I D R F L F E N F K S L F L D D - - - - - R E E P D N N I N R R A E M S P
pt028946_POPTR_    - - - - R D E E D - - - E E K G G A A T L S D V D R F L F E N F R S L Y I N D D D G N F Q K E S D R R - S R G G D Q A P
 
AT1G79960.1     S D D S D D D D D D D D Y R H R F E R T W G H A V Y D S P K - - - Q P P D L L R T E R L S P P P G S S E G R - - - - - -
gm016972_Glyma0    K L D P - - - - - - - - - - - - - - - - - - - I R F D S S R - - - - - - - - - - - - R F F T D - - - - - - - - - - - - -
pt028946_POPTR_    S M N E - - - - - - - - - - - - - - - - - - - I L I D S P R Y I D Q P L D L C G S H R F F V E R G S S S G S L V E E A R
 
AT1G79960.1     - - - - P S M E T - - - - - T S T S S E R Q S R S T L - - - - - - - - - - - - - - - V L P E N C I A V L R Y T D E P Q E
gm016972_Glyma0    - - - - A T T E E - G S S S A M S E S E T A E E S T V - - - - - - - - - - - - - - - - V P G N C V V V L A N S G N P S E
pt028946_POPTR_    S S L T A T S E N M G S S S S S S S T S V S T T S T L N D D S A T V A S N D P K Q V R L P D D C I A V L T Y S P S P Y D
 
AT1G79960.1     D F R Q S M V E M M E S K L G M R E S E V D W D L M E E L L F C Y L D L N D K K S H K F I L S A F V D L I I A L R E K E
gm016972_Glyma0    D F Q R S M E G V V E A R L - R N C E K V D W D F M Q E L L F C H M N L N Q K K S H K F I L S A F V N V V T A M R S P P
pt028946_POPTR_    D F R R S M Q E M V E E K L - Q N N G K V D W D F M E E L L L C Y L N L N E K T S H K F I L S A F V D L I V G L R K N P
 
AT1G79960.1     K - R I T R K G H V R S - L S T R A A R D R L R K R M I M S D N - - - - - - - -
gm016972_Glyma0    E I A P P K P T P P R S V R T V R I G R E V R K K T K - - - E A V T L E F R S Q
pt028946_POPTR_    D - - - - - K V P V R S - R H S R I A R S G G R R K L - - - E N V T - - - - - -
 
0