fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G79960.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm016972 not found in 244aa AT1G79960.1 1st_1st 0.221198156 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G79960.1     MPNPLQKSLHGYLSKIK-KETGKLQLSSSHSFSSSKNWVLG--KHPKKLSFSFKHRRRSS
gm016972_Glyma0 --MKITKSLRDYIFRIKIHQRSQIKL-------PSKKWILAACKHPRTPSLDIDNMKNNN
                    : ***:.*: :** :: .:::*       .**:*:*.  ***:. *:.:.: :...

AT1G79960.1     KTRFSKEEPVYHQDSAHAATLSDIDRFLEENFKSLCIRDDQEDDQHQARVTKNKEKRESS
gm016972_Glyma0 ----VKDD---------EAMLADIDRFLFENFKSLFLDDREEPDNNINR-----------
                     *::          * *:****** ****** : * :* *::  *           

AT1G79960.1     SDDSDDDDDDDDYRHRFERTWGHAVYDSPKQPPDLLR---TERLSPPPGSSEGRPSMETT
gm016972_Glyma0 ---------------RAEM--------SPKLDP--IRFDSSRRFFTDATTEEGSSSAMSE
                               * *         ***  *  :*   :.*: . . :.** .*  : 

AT1G79960.1     STSSERQSRSTLVLPENCIAVLRYTDEPQEDFRQSMVEMMESKLGMRESE-VDWDLMEEL
gm016972_Glyma0 SETAEEST----VVPGNCVVVLANSGNPSEDFQRSMEGVVEARL--RNCEKVDWDFMQEL
                * ::*..:    *:* **:.**  :.:*.***::**  ::*::*  *:.* ****:*:**

AT1G79960.1     LFCYLDLNDKKSHKFILSAFVDLIIALRE------------KEKRITRKG-HVRSLSTRA
gm016972_Glyma0 LFCHMNLNQKKSHKFILSAFVNVVTAMRSPPEIAPPKPTPPRSVRTVRIGREVRKKTKEA
                ***:::**:************::: *:*.            :. * .* * .**. :..*

AT1G79960.1     ARDRLRKRMIMSDN
gm016972_Glyma0 VTLEFRSQ------
                .  .:*.:
BoxShade v3.31 C (beta, 970507) Output
AT1G79960.1     M P N P L Q K S L H G Y L S K I K - K E T G K L Q L S S S H S F S S S K N W V L G - - K H P K K L S F S F K H R R R S S
gm016972_Glyma0    - - M K I T K S L R D Y I F R I K I H Q R S Q I K L - - - - - - - P S K K W I L A A C K H P R T P S L D I D N M K N N N
 
AT1G79960.1     K T R F S K E E P V Y H Q D S A H A A T L S D I D R F L E E N F K S L C I R D D Q E D D Q H Q A R V T K N K E K R E S S
gm016972_Glyma0    - - - - V K D D - - - - - - - - - E A M L A D I D R F L F E N F K S L F L D D R E E P D N N I N R - - - - - - - - - - -
 
AT1G79960.1     S D D S D D D D D D D D Y R H R F E R T W G H A V Y D S P K Q P P D L L R - - - T E R L S P P P G S S E G R P S M E T T
gm016972_Glyma0    - - - - - - - - - - - - - - - R A E M - - - - - - - - S P K L D P - - I R F D S S R R F F T D A T T E E G S S S A M S E
 
AT1G79960.1     S T S S E R Q S R S T L V L P E N C I A V L R Y T D E P Q E D F R Q S M V E M M E S K L G M R E S E - V D W D L M E E L
gm016972_Glyma0    S E T A E E S T - - - - V V P G N C V V V L A N S G N P S E D F Q R S M E G V V E A R L - - R N C E K V D W D F M Q E L
 
AT1G79960.1     L F C Y L D L N D K K S H K F I L S A F V D L I I A L R E - - - - - - - - - - - - K E K R I T R K G - H V R S L S T R A
gm016972_Glyma0    L F C H M N L N Q K K S H K F I L S A F V N V V T A M R S P P E I A P P K P T P P R S V R T V R I G R E V R K K T K E A
 
AT1G79960.1     A R D R L R K R M I M S D N
gm016972_Glyma0    V T L E F R S Q - - - - - -
 
0