fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G80580.1 NLEKMGLELDLSLGLL at 242/256 in AT1G80580.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp024321 SSAGRSLELDLKLGFG in 441/503 AT1G80580.1 1st_1st 0.221674876 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G80580.1     -----MENSYTVDGHRLQYSVPLSSMHETSQNSETYGLSKESPLVC----MPLF------
pp024321_Pp1s20 MALHDMLGG-TVLAKRKWRGISPDNCTAKRANFSGFNSSASSLLLVDNIDIPVLQDMDYS
                     * .. ** .:*   .:. ..   .  * . :. * .* *:     :*::      

AT1G80580.1     --------------ETNTTSF---------DISSL-FSFNPKPEPENTHRVMD-DSIAAV
pp024321_Pp1s20 HRFSGDQYLYEILGELNPTSFLAGYGESETEVSPVPASFQSCESPNSSVEVQDLDGIAAV
                              * *.***         ::*.:  **:.  .*:.: .* * *.****

AT1G80580.1     VGENVLFG-----DKNKVSDH---------------------------------------
pp024321_Pp1s20 VGQTVLFGKPETCDLNQ--DHCSALLTSAFSMERSSWLAPPARQGDNQLAAQVNQISPTH
                **:.****     * *:  **                                       

AT1G80580.1     ------------------------------------LTKE-------------GGVKRGR
pp024321_Pp1s20 SWNFGLASPTSQYPKQFTADGLRFALSNFRPTPDRILMKQSADVKPKFQPQLYGSVENCR
                                                    * *:             *.*:. *

AT1G80580.1     --------------------KMPQKTG---GFMGVRKRPWGRWSAEIRDRIGRCRHWLGT
pp024321_Pp1s20 HSLDVSPTGVMPSLGKSSAAKVPAATSTGRSFRGVRKRPWGRWSAEIRDRIGRCRHWLGT
                                    *:*  *.   .* ***************************

AT1G80580.1     FDTAEEAARAYDAAARRLRGTKAKTNFVIPPLFPK-------------EIAQAQEDNRMR
pp024321_Pp1s20 FDTAEDAARAYDSAARALRGSKAKTNFA-PPCSDDLRGKIESTVCNQLSICRSQLTSRAQ
                *****:******:*** ***:******. **   .             .*.::*  .* :

AT1G80580.1     ---------QKQ----------KKKKKKKVSVRKCVKVTSVAQLFDDANFINSSSIKGNV
pp024321_Pp1s20 AVRRTNPAPQRRSYGSTVPSYSKECKGSKLSSAK--GVIRVSDEVRTSEFMTHPPKKGVL
                         *::          *: * .*:*  *   *  *:: .  ::*:. .. ** :

AT1G80580.1     ISSI----------------DNLEKMGLELDLSLGL-LSRK-------------------
pp024321_Pp1s20 LQSAMLSQNQAHALLGRDCSGSSAGRSLELDLKLGFGLSPKSCSSLESTQESTVTYQSSE
                :.*                 ..    .*****.**: ** *                   

AT1G80580.1     -----------------------------
pp024321_Pp1s20 CSFPSVSELYSSSSFSPGSPSPLSSHAWH
BoxShade v3.31 C (beta, 970507) Output
AT1G80580.1     - - - - - M E N S Y T V D G H R L Q Y S V P L S S M H E T S Q N S E T Y G L S K E S P L V C - - - - M P L F - - - - - -
pp024321_Pp1s20    M A L H D M L G G - T V L A K R K W R G I S P D N C T A K R A N F S G F N S S A S S L L L V D N I D I P V L Q D M D Y S
 
AT1G80580.1     - - - - - - - - - - - - - - E T N T T S F - - - - - - - - - D I S S L - F S F N P K P E P E N T H R V M D - D S I A A V
pp024321_Pp1s20    H R F S G D Q Y L Y E I L G E L N P T S F L A G Y G E S E T E V S P V P A S F Q S C E S P N S S V E V Q D L D G I A A V
 
AT1G80580.1     V G E N V L F G - - - - - D K N K V S D H - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp024321_Pp1s20    V G Q T V L F G K P E T C D L N Q - - D H C S A L L T S A F S M E R S S W L A P P A R Q G D N Q L A A Q V N Q I S P T H
 
AT1G80580.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L T K E - - - - - - - - - - - - - G G V K R G R
pp024321_Pp1s20    S W N F G L A S P T S Q Y P K Q F T A D G L R F A L S N F R P T P D R I L M K Q S A D V K P K F Q P Q L Y G S V E N C R
 
AT1G80580.1     - - - - - - - - - - - - - - - - - - - - K M P Q K T G - - - G F M G V R K R P W G R W S A E I R D R I G R C R H W L G T
pp024321_Pp1s20    H S L D V S P T G V M P S L G K S S A A K V P A A T S T G R S F R G V R K R P W G R W S A E I R D R I G R C R H W L G T
 
AT1G80580.1     F D T A E E A A R A Y D A A A R R L R G T K A K T N F V I P P L F P K - - - - - - - - - - - - - E I A Q A Q E D N R M R
pp024321_Pp1s20    F D T A E D A A R A Y D S A A R A L R G S K A K T N F A - P P C S D D L R G K I E S T V C N Q L S I C R S Q L T S R A Q
 
AT1G80580.1     - - - - - - - - - Q K Q - - - - - - - - - - K K K K K K K V S V R K C V K V T S V A Q L F D D A N F I N S S S I K G N V
pp024321_Pp1s20    A V R R T N P A P Q R R S Y G S T V P S Y S K E C K G S K L S S A K - - G V I R V S D E V R T S E F M T H P P K K G V L
 
AT1G80580.1     I S S I - - - - - - - - - - - - - - - - D N L E K M G L E L D L S L G L - L S R K - - - - - - - - - - - - - - - - - - -
pp024321_Pp1s20    L Q S A M L S Q N Q A H A L L G R D C S G S S A G R S L E L D L K L G F G L S P K S C S S L E S T Q E S T V T Y Q S S E
 
AT1G80580.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp024321_Pp1s20    C S F P S V S E L Y S S S S F S P G S P S P L S S H A W H
 
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